Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NUTF2P8-201ENST00000604593 363 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AC087045.1-201ENST00000605856 382 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 uc_338.15-201ENST00000615470 191 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 Z69720.2-201ENST00000624755 279 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 AC112487.2-201ENST00000637950 304 ntBASIC2.84□□□□□ -1.95
ZIC3O60481 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.84□□□□□ -1.96
ZIC3O60481 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.84□□□□□ -1.96
ZIC3O60481 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
ZIC3O60481 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZIC3O60481 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZIC3O60481 ZNF519P1-201ENST00000449011 1626 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.83□□□□□ -1.96
ZIC3O60481 MAPK10-322ENST00000641485 4530 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 Y_RNA.356-201ENST00000365475 113 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.83□□□□□ -1.96
ZIC3O60481 SNORD116-11-201ENST00000383882 92 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU6-198P-201ENST00000384258 104 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 Y_RNA.474-201ENST00000384341 102 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 SNORD15B-201ENST00000384714 146 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 MIR34A-201ENST00000385130 110 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.83□□□□□ -1.96
ZIC3O60481 AL096701.2-201ENST00000416920 238 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.83□□□□□ -1.96
ZIC3O60481 NCOR1P3-201ENST00000420479 303 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RPL7P37-201ENST00000425095 738 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RPL23AP83-201ENST00000434984 473 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC104472.2-201ENST00000469035 601 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU6-277P-201ENST00000516272 106 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU1-143P-201ENST00000516296 146 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 Y_RNA.682-201ENST00000516457 100 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU6-566P-201ENST00000516790 107 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU6-273P-201ENST00000516937 96 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNA5SP454-201ENST00000517231 127 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 COPS8P3-201ENST00000526024 482 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AC025423.5-201ENST00000550230 219 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC100830.2-201ENST00000581636 240 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 HMGN2P15-201ENST00000585707 270 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AC243960.4-201ENST00000600532 288 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 U1.23-201ENST00000610293 146 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AC099778.2-201ENST00000610904 211 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.83□□□□□ -1.96
ZIC3O60481 AC104237.2-201ENST00000612456 443 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 RNU1-68P-201ENST00000615382 146 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 U1.39-201ENST00000621562 146 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 AL359697.1-201ENST00000624879 587 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.83□□□□□ -1.96
ZIC3O60481 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZIC3O60481 ZNF826P-207ENST00000622273 1910 ntBASIC2.83□□□□□ -1.96
ZIC3O60481 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZIC3O60481 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZIC3O60481 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZIC3O60481 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ZIC3O60481 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-37P-201ENST00000362692 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-11P-201ENST00000364234 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-7-201ENST00000364784 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-8-201ENST00000365467 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-25P-201ENST00000383873 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-1-201ENST00000383898 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-48P-201ENST00000384161 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-36P-201ENST00000384172 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-4P-201ENST00000384205 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-5P-201ENST00000384238 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-72P-201ENST00000384285 79 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-3P-201ENST00000384314 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-16P-201ENST00000384385 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-15P-201ENST00000384534 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-2-201ENST00000384627 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-29P-201ENST00000384637 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-9-201ENST00000384776 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-33P-201ENST00000384793 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.82□□□□□ -1.96
ZIC3O60481 MIR548K-201ENST00000408406 116 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AC016831.2-201ENST00000417179 352 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 MTND1P17-201ENST00000448961 204 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 RN7SL442P-201ENST00000473804 320 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 MTCO1P29-201ENST00000496868 288 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AC008526.1-201ENST00000509149 338 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.82□□□□□ -1.96
ZIC3O60481 NACAP3-201ENST00000552100 481 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.82□□□□□ -1.96
ZIC3O60481 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.82□□□□□ -1.96
ZIC3O60481 RNU6-6P-201ENST00000606623 107 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 MIR6134-201ENST00000617606 109 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 RMST_7.1-201ENST00000621935 268 ntBASIC2.82□□□□□ -1.96
ZIC3O60481 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms