Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RNU6-271P-201ENST00000363858 105 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 RNU6-560P-201ENST00000364007 108 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 SNORD46.1-201ENST00000364139 104 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.15□□□□□ -2.23
SSNA1O43805 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 AC016769.2-201ENST00000414815 475 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 AC009518.2-201ENST00000418056 731 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 RPS25P9-201ENST00000435591 252 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AL117351.1-201ENST00000438864 766 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 AL831737.1-201ENST00000441288 271 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AL353752.1-201ENST00000454946 260 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC108059.3-201ENST00000456388 214 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.15□□□□□ -2.23
SSNA1O43805 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.15□□□□□ -2.23
SSNA1O43805 RPL30P6-201ENST00000475925 342 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AP001025.1-201ENST00000486139 332 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC108729.1-201ENST00000487812 947 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.15□□□□□ -2.23
SSNA1O43805 LRRC6P1-201ENST00000532188 885 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.15□□□□□ -2.23
SSNA1O43805 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.15□□□□□ -2.23
SSNA1O43805 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC130324.3-201ENST00000614165 542 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC021755.4-201ENST00000616620 456 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 MIR1248-201ENST00000629190 106 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC092881.1-201ENST00000638218 2733 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.15□□□□□ -2.23
SSNA1O43805 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
SSNA1O43805 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SSNA1O43805 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SSNA1O43805 SMIM11P1-201ENST00000369586 178 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SSNA1O43805 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SSNA1O43805 RN7SKP223-201ENST00000410582 62 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 VPS26BP1-201ENST00000417155 755 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 Z98742.3-201ENST00000418637 326 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.14□□□□□ -2.23
SSNA1O43805 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.14□□□□□ -2.23
SSNA1O43805 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.14□□□□□ -2.23
SSNA1O43805 CR769776.1-201ENST00000441254 787 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.14□□□□□ -2.23
SSNA1O43805 AC003071.1-201ENST00000451219 789 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.14□□□□□ -2.23
SSNA1O43805 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.14□□□□□ -2.23
SSNA1O43805 RNA5SP445-201ENST00000515889 115 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 SUB1P4-201ENST00000566062 339 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 MIR3169-201ENST00000578032 83 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 AC097468.3-201ENST00000607956 456 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 AC018926.1-201ENST00000616335 435 ntBASIC1.14□□□□□ -2.23
SSNA1O43805 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
SSNA1O43805 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SSNA1O43805 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SSNA1O43805 snoU2_19.1-201ENST00000362361 80 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RNU6-212P-201ENST00000362642 104 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 U8.1-201ENST00000362843 134 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RNA5SP493-201ENST00000364115 91 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 MIR29B2-201ENST00000385055 81 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RNA5SP171-201ENST00000391071 115 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RNU2-23P-201ENST00000410545 195 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AC092809.3-201ENST00000415453 231 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.13□□□□□ -2.23
SSNA1O43805 MTCO1P44-201ENST00000441935 243 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.13□□□□□ -2.23
SSNA1O43805 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.13□□□□□ -2.23
SSNA1O43805 snoU109.2-201ENST00000459316 135 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RPL31P58-201ENST00000469001 379 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 RPL30P1-201ENST00000488676 339 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 SUMO2P5-201ENST00000506790 245 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.13□□□□□ -2.23
SSNA1O43805 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 SNORA31.24-201ENST00000517232 57 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AP004247.1-201ENST00000531556 1289 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.13□□□□□ -2.23
SSNA1O43805 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 MIR1273C-201ENST00000578669 77 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AL355472.4-201ENST00000610233 626 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AL365204.3-201ENST00000612448 685 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AL590240.4-201ENST00000616908 390 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 AP001002.2-201ENST00000625137 386 ntBASIC1.13□□□□□ -2.23
SSNA1O43805 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
SSNA1O43805 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SSNA1O43805 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.12□□□□□ -2.23
SSNA1O43805 RNU6-253P-201ENST00000384730 105 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SSNA1O43805 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.12□□□□□ -2.23
SSNA1O43805 AL365338.1-201ENST00000422282 858 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.12□□□□□ -2.23
SSNA1O43805 TOMM22P2-201ENST00000430735 237 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AL139415.2-201ENST00000431968 163 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AL135790.2-201ENST00000437701 267 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.12□□□□□ -2.23
SSNA1O43805 MTND2P4-201ENST00000445034 1004 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC007677.1-201ENST00000445757 515 ntBASIC1.12□□□□□ -2.23
SSNA1O43805 AC245517.4-201ENST00000448601 281 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms