Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.16□□□□□ -1.9
MSI1O43347 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
MSI1O43347 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.16□□□□□ -1.9
MSI1O43347 CYCSP27-201ENST00000527643 293 ntBASIC3.16□□□□□ -1.9
MSI1O43347 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
MSI1O43347 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSI1O43347 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.16□□□□□ -1.9
MSI1O43347 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.16□□□□□ -1.9
MSI1O43347 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
MSI1O43347 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.16□□□□□ -1.9
MSI1O43347 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.16□□□□□ -1.9
MSI1O43347 MIR4795-201ENST00000584182 89 ntBASIC3.16□□□□□ -1.9
MSI1O43347 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
MSI1O43347 AL022345.1-201ENST00000607292 135 ntBASIC3.16□□□□□ -1.9
MSI1O43347 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.16□□□□□ -1.9
MSI1O43347 FTX_3.1-201ENST00000610451 147 ntBASIC3.16□□□□□ -1.9
MSI1O43347 AC104237.2-201ENST00000612456 443 ntBASIC3.16□□□□□ -1.9
MSI1O43347 RMST_4.1-201ENST00000616886 107 ntBASIC3.16□□□□□ -1.9
MSI1O43347 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.16□□□□□ -1.9
MSI1O43347 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MSI1O43347 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MSI1O43347 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
MSI1O43347 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
MSI1O43347 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
MSI1O43347 Y_RNA.135-201ENST00000363439 95 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
MSI1O43347 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
MSI1O43347 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MSI1O43347 Y_RNA.480-201ENST00000384364 102 ntBASIC3.15□□□□□ -1.91
MSI1O43347 Y_RNA.510-201ENST00000384511 114 ntBASIC3.15□□□□□ -1.91
MSI1O43347 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
MSI1O43347 SNORA40C-201ENST00000391285 128 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
MSI1O43347 MIR450B-201ENST00000401182 78 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
MSI1O43347 MIR1289-1-201ENST00000408836 144 ntBASIC3.15□□□□□ -1.91
MSI1O43347 VN1R36P-201ENST00000414936 291 ntBASIC3.15□□□□□ -1.91
MSI1O43347 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
MSI1O43347 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.15□□□□□ -1.91
MSI1O43347 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.15□□□□□ -1.91
MSI1O43347 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
MSI1O43347 AC117440.1-201ENST00000474107 571 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RN7SL429P-201ENST00000479090 223 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RN7SL489P-201ENST00000486185 223 ntBASIC3.15□□□□□ -1.91
MSI1O43347 AC011005.2-201ENST00000487324 359 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RN7SL327P-201ENST00000488659 223 ntBASIC3.15□□□□□ -1.91
MSI1O43347 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.15□□□□□ -1.91
MSI1O43347 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
MSI1O43347 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.15□□□□□ -1.91
MSI1O43347 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.15□□□□□ -1.91
MSI1O43347 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.15□□□□□ -1.91
MSI1O43347 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.15□□□□□ -1.91
MSI1O43347 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MSI1O43347 uc_338.15-201ENST00000615470 191 ntBASIC3.15□□□□□ -1.91
MSI1O43347 RN7SL853P-201ENST00000617250 223 ntBASIC3.15□□□□□ -1.91
MSI1O43347 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
MSI1O43347 AC118273.1-201ENST00000525324 3006 ntBASIC3.15□□□□□ -1.91
MSI1O43347 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MSI1O43347 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MSI1O43347 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MSI1O43347 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
MSI1O43347 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.14□□□□□ -1.91
MSI1O43347 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.14□□□□□ -1.91
MSI1O43347 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MSI1O43347 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
MSI1O43347 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
MSI1O43347 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MSI1O43347 AC138393.1-203ENST00000327086 343 ntBASIC3.14□□□□□ -1.91
MSI1O43347 Y_RNA.212-201ENST00000364177 102 ntBASIC3.14□□□□□ -1.91
MSI1O43347 SNORD14B-201ENST00000364533 90 ntBASIC3.14□□□□□ -1.91
MSI1O43347 Y_RNA.339-201ENST00000365325 102 ntBASIC3.14□□□□□ -1.91
MSI1O43347 RNU6-1013P-201ENST00000384180 107 ntBASIC3.14□□□□□ -1.91
MSI1O43347 Y_RNA.535-201ENST00000384612 99 ntBASIC3.14□□□□□ -1.91
MSI1O43347 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
MSI1O43347 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
MSI1O43347 TMEM167AP1-201ENST00000423409 219 ntBASIC3.14□□□□□ -1.91
MSI1O43347 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
MSI1O43347 RPL37P4-201ENST00000448908 268 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.14□□□□□ -1.91
MSI1O43347 AL583843.1-201ENST00000456070 346 ntBASIC3.14□□□□□ -1.91
MSI1O43347 S100A11P2-201ENST00000467589 312 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.14□□□□□ -1.91
MSI1O43347 Y_RNA.682-201ENST00000516457 100 ntBASIC3.14□□□□□ -1.91
MSI1O43347 RNU6-928P-201ENST00000516876 104 ntBASIC3.14□□□□□ -1.91
MSI1O43347 SNORA31.19-201ENST00000517079 126 ntBASIC3.14□□□□□ -1.91
MSI1O43347 RNU6-323P-201ENST00000521915 107 ntBASIC3.14□□□□□ -1.91
MSI1O43347 COPS8P3-201ENST00000526024 482 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.14□□□□□ -1.91
MSI1O43347 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
MSI1O43347 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
MSI1O43347 AL355375.2-201ENST00000574825 175 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AC104984.5-201ENST00000586878 94 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AC023043.2-201ENST00000589678 1026 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AL138726.1-201ENST00000614873 333 ntBASIC3.14□□□□□ -1.91
MSI1O43347 U2.21-201ENST00000637295 81 ntBASIC3.14□□□□□ -1.91
MSI1O43347 MIR1302-1-201ENST00000637932 143 ntBASIC3.14□□□□□ -1.91
MSI1O43347 AF127577.6-201ENST00000623352 2191 ntBASIC3.14□□□□□ -1.91
MSI1O43347 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms