Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CTIFO43310 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.33□□□□□ -1.88
CTIFO43310 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CTIFO43310 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.33□□□□□ -1.88
CTIFO43310 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.33□□□□□ -1.88
CTIFO43310 MIR3609-201ENST00000582661 80 ntBASIC3.33□□□□□ -1.88
CTIFO43310 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.33□□□□□ -1.88
CTIFO43310 AC113139.1-201ENST00000605049 239 ntBASIC3.33□□□□□ -1.88
CTIFO43310 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.33□□□□□ -1.88
CTIFO43310 AL031601.2-202ENST00000622650 282 ntBASIC3.33□□□□□ -1.88
CTIFO43310 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
CTIFO43310 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CTIFO43310 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTIFO43310 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTIFO43310 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.32□□□□□ -1.88
CTIFO43310 MIR1302-11-201ENST00000408051 138 ntBASIC3.32□□□□□ -1.88
CTIFO43310 MIR1302-9-201ENST00000408365 138 ntBASIC3.32□□□□□ -1.88
CTIFO43310 MIR1302-10-201ENST00000408734 138 ntBASIC3.32□□□□□ -1.88
CTIFO43310 RNU6-607P-201ENST00000411283 108 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.32□□□□□ -1.88
CTIFO43310 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.32□□□□□ -1.88
CTIFO43310 SSXP4-201ENST00000451349 245 ntBASIC3.32□□□□□ -1.88
CTIFO43310 RN7SL297P-201ENST00000483161 293 ntBASIC3.32□□□□□ -1.88
CTIFO43310 RN7SL633P-201ENST00000488974 297 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 RNU6-1088P-201ENST00000516850 104 ntBASIC3.32□□□□□ -1.88
CTIFO43310 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
CTIFO43310 RNU6-273P-201ENST00000516937 96 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.32□□□□□ -1.88
CTIFO43310 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTIFO43310 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.32□□□□□ -1.88
CTIFO43310 HIGD1AP1-201ENST00000550979 275 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 AMZ2P1-203ENST00000565833 850 ntBASIC3.32□□□□□ -1.88
CTIFO43310 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
CTIFO43310 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.32□□□□□ -1.88
CTIFO43310 LRRC37A5P-203ENST00000580181 585 ntBASIC3.32□□□□□ -1.88
CTIFO43310 POLR3GP2-201ENST00000588366 668 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AC022432.1-201ENST00000595739 310 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AC005034.5-201ENST00000604219 466 ntBASIC3.32□□□□□ -1.88
CTIFO43310 MIR1302-2-201ENST00000607096 138 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AL022345.1-201ENST00000607292 135 ntBASIC3.32□□□□□ -1.88
CTIFO43310 AL359198.2-201ENST00000611836 194 ntBASIC3.32□□□□□ -1.88
CTIFO43310 uc_338.15-201ENST00000615470 191 ntBASIC3.32□□□□□ -1.88
CTIFO43310 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.32□□□□□ -1.88
CTIFO43310 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.32□□□□□ -1.88
CTIFO43310 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.32□□□□□ -1.88
CTIFO43310 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTIFO43310 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
CTIFO43310 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CTIFO43310 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTIFO43310 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
CTIFO43310 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CTIFO43310 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RNU6-1303P-201ENST00000364841 107 ntBASIC3.31□□□□□ -1.88
CTIFO43310 Y_RNA.384-201ENST00000383909 102 ntBASIC3.31□□□□□ -1.88
CTIFO43310 SNORA75B-201ENST00000384053 137 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RNU4-14P-201ENST00000410858 122 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
CTIFO43310 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.31□□□□□ -1.88
CTIFO43310 AC007560.1-201ENST00000426912 237 ntBASIC3.31□□□□□ -1.88
CTIFO43310 MTCO2P12-201ENST00000427426 682 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC005534.2-201ENST00000431047 433 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.31□□□□□ -1.88
CTIFO43310 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
CTIFO43310 MTCYBP6-201ENST00000441810 138 ntBASIC3.31□□□□□ -1.88
CTIFO43310 BRK1P2-201ENST00000442875 223 ntBASIC3.31□□□□□ -1.88
CTIFO43310 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RPL7P43-201ENST00000478876 753 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
CTIFO43310 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.31□□□□□ -1.88
CTIFO43310 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.31□□□□□ -1.88
CTIFO43310 MIR892C-201ENST00000516410 77 ntBASIC3.31□□□□□ -1.88
CTIFO43310 RNU6-572P-201ENST00000516724 80 ntBASIC3.31□□□□□ -1.88
CTIFO43310 SNORA31.19-201ENST00000517079 126 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC069113.1-201ENST00000517763 267 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.31□□□□□ -1.88
CTIFO43310 MIR3124-201ENST00000582636 67 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
CTIFO43310 AL355598.1-201ENST00000604169 202 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AL670379.10-201ENST00000604330 253 ntBASIC3.31□□□□□ -1.88
CTIFO43310 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC007938.3-201ENST00000604965 623 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AL670379.9-201ENST00000605428 253 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC002044.1-201ENST00000606707 158 ntBASIC3.31□□□□□ -1.88
CTIFO43310 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.31□□□□□ -1.88
CTIFO43310 MIR7851-201ENST00000610611 160 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC096577.2-201ENST00000611455 153 ntBASIC3.31□□□□□ -1.88
CTIFO43310 AC068831.7-201ENST00000616954 363 ntBASIC3.31□□□□□ -1.88
CTIFO43310 U6.99-201ENST00000637524 83 ntBASIC3.31□□□□□ -1.88
CTIFO43310 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.31□□□□□ -1.88
CTIFO43310 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.3□□□□□ -1.88
CTIFO43310 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CTIFO43310 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTIFO43310 RNU6-254P-201ENST00000363377 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms