Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL121890.1-201ENST00000435457 205 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 RPS24P1-201ENST00000438550 371 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN3O15551 EPS15P1-201ENST00000448836 336 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC022493.1-201ENST00000492984 337 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 YWHAEP4-201ENST00000505390 198 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC112206.3-201ENST00000514578 389 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.19□□□□□ -2.06
CLDN3O15551 FAM92A1P1-201ENST00000528023 890 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AP000873.5-201ENST00000533906 236 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 HMGN1P30-201ENST00000589286 268 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 BNIP3P30-201ENST00000601184 574 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC112191.3-201ENST00000604371 277 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN3O15551 AC012409.4-201ENST00000612923 249 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC009090.3-201ENST00000616553 565 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN3O15551 RBBP8P1-201ENST00000449447 1844 ntBASIC2.19□□□□□ -2.06
CLDN3O15551 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN3O15551 RNU5E-1-201ENST00000362477 120 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 RNU4-1-201ENST00000363925 141 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 MIR10A-201ENST00000385043 110 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC127391.1-201ENST00000411737 98 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AIMP1P2-201ENST00000425294 312 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AL627311.1-201ENST00000431514 115 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 USP9YP8-201ENST00000441913 500 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC010095.1-201ENST00000443543 144 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC117503.1-201ENST00000472241 394 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 UBL5P3-201ENST00000475112 231 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 RPL7P43-201ENST00000478876 753 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 MTAPP1-201ENST00000489154 819 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN3O15551 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.18□□□□□ -2.06
CLDN3O15551 MIR548AC-201ENST00000585049 88 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC073410.2-201ENST00000603240 332 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AL713866.2-201ENST00000603579 219 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC009314.1-201ENST00000603871 304 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AL139286.2-201ENST00000606838 396 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC138749.5-201ENST00000611461 208 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC004223.4-201ENST00000612426 332 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC116165.2-201ENST00000616705 206 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AC008121.3-201ENST00000618726 433 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 AP003400.5-201ENST00000624827 617 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 MIR3529-201ENST00000637713 78 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CLDN3O15551 AC103710.2-202ENST00000641454 2853 ntBASIC2.18□□□□□ -2.06
CLDN3O15551 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNA5SP138-201ENST00000365098 114 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNU6-1032P-201ENST00000384100 107 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNU6-1140P-201ENST00000410517 106 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNU2-39P-201ENST00000410604 198 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 UBE2V1P10-201ENST00000414685 269 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 EDDM3CP-201ENST00000415977 425 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN3O15551 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN3O15551 UBE2D3P4-201ENST00000441973 436 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN3O15551 PSPHP1-201ENST00000450062 261 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 snoU13.26-201ENST00000459452 105 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 HMGB1P30-201ENST00000492455 606 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC117522.1-201ENST00000509821 380 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 SNORA4.4-201ENST00000515921 135 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN3O15551 AP004607.1-201ENST00000524456 203 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AP001372.4-201ENST00000524889 472 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC022878.1-201ENST00000530684 149 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN3O15551 AC136619.2-201ENST00000563361 631 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 RPL30P11-203ENST00000598995 310 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN3O15551 AC131159.1-201ENST00000621854 213 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 YWHAEP7-203ENST00000622054 312 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 AP006437.1-201ENST00000641440 3685 ntBASIC2.17□□□□□ -2.06
CLDN3O15551 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN3O15551 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN3O15551 RNY1P12-201ENST00000364251 105 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 RNU1-57P-201ENST00000384491 166 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 RNU6-1179P-201ENST00000384667 107 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 MIR561-201ENST00000385216 97 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 RNA5SP111-201ENST00000411386 101 ntBASIC2.16□□□□□ -2.06
CLDN3O15551 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN3O15551 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN3O15551 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN3O15551 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN3O15551 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN3O15551 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN3O15551 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms