Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-858P-201ENST00000362436 107 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-996P-201ENST00000365438 107 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-72P-201ENST00000384285 79 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-517P-201ENST00000384362 110 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-748P-201ENST00000384648 107 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU6-903P-201ENST00000391270 109 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
CLDN4O14493 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 CIR1P3-201ENST00000405137 479 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 TOMM20P4-201ENST00000427861 435 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AL669831.1-202ENST00000428504 417 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AL606489.2-201ENST00000433886 234 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC004383.1-201ENST00000438135 289 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 GTF2IP13-201ENST00000438487 386 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 AL441985.1-201ENST00000457727 251 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 SNRPFP3-201ENST00000457792 225 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 GMFBP1-201ENST00000467831 427 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 MRPL42P6-201ENST00000486397 371 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC011005.2-201ENST00000487324 359 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC114781.4-201ENST00000513707 639 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN4O14493 OR5AQ1P-201ENST00000527596 927 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AP003034.1-201ENST00000534621 422 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC135279.1-201ENST00000543493 504 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 BNIP3P6-201ENST00000549284 499 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 CR381653.2-201ENST00000624041 768 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN4O14493 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
CLDN4O14493 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN4O14493 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN4O14493 AL139276.1-201ENST00000311910 1001 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 MTCO3P40-201ENST00000392516 676 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 RNA5SP184-201ENST00000411071 108 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 Z98742.2-201ENST00000431564 187 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AC073415.1-201ENST00000449240 153 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.59□□□□□ -1.99
CLDN4O14493 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN4O14493 AC103975.1-201ENST00000482506 483 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN4O14493 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN4O14493 AC074344.1-201ENST00000512823 224 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 Y_RNA.687-201ENST00000516558 91 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN4O14493 HIF1AP1-201ENST00000553642 175 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN4O14493 AC017083.3-201ENST00000609955 700 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AC015540.1-201ENST00000615828 501 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 RMST_4.1-201ENST00000616886 107 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AC068792.1-201ENST00000621354 417 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 AC124864.2-201ENST00000624736 186 ntBASIC2.59□□□□□ -1.99
CLDN4O14493 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN4O14493 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.59□□□□□ -2
CLDN4O14493 MTND4P14-201ENST00000435799 1354 ntBASIC2.59□□□□□ -2
CLDN4O14493 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 AC006020.1-201ENST00000420179 1854 ntBASIC2.58□□□□□ -2
CLDN4O14493 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 RNA5SP432-201ENST00000362480 116 ntBASIC2.58□□□□□ -2
CLDN4O14493 Y_RNA.41-201ENST00000362646 102 ntBASIC2.58□□□□□ -2
CLDN4O14493 RNU6-1303P-201ENST00000364841 107 ntBASIC2.58□□□□□ -2
CLDN4O14493 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 RNU6-393P-201ENST00000384475 107 ntBASIC2.58□□□□□ -2
CLDN4O14493 RNU6-1127P-201ENST00000384580 107 ntBASIC2.58□□□□□ -2
CLDN4O14493 MIR9-1-201ENST00000385198 89 ntBASIC2.58□□□□□ -2
CLDN4O14493 SNORD70.1-201ENST00000391007 85 ntBASIC2.58□□□□□ -2
CLDN4O14493 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDN4O14493 RNA5SP21-201ENST00000410917 96 ntBASIC2.58□□□□□ -2
CLDN4O14493 RNU6-607P-201ENST00000411283 108 ntBASIC2.58□□□□□ -2
CLDN4O14493 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.58□□□□□ -2
CLDN4O14493 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
CLDN4O14493 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.58□□□□□ -2
CLDN4O14493 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.58□□□□□ -2
CLDN4O14493 FABP5P14-201ENST00000437273 393 ntBASIC2.58□□□□□ -2
CLDN4O14493 RPL7P54-201ENST00000438336 674 ntBASIC2.58□□□□□ -2
CLDN4O14493 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.58□□□□□ -2
CLDN4O14493 CALM1P1-201ENST00000442082 433 ntBASIC2.58□□□□□ -2
CLDN4O14493 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
CLDN4O14493 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
CLDN4O14493 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
CLDN4O14493 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.58□□□□□ -2
CLDN4O14493 SCARNA18-201ENST00000459004 134 ntBASIC2.58□□□□□ -2
CLDN4O14493 SRRM1P2-201ENST00000464531 1192 ntBASIC2.58□□□□□ -2
CLDN4O14493 AC008571.1-201ENST00000467232 300 ntBASIC2.58□□□□□ -2
CLDN4O14493 AC003982.1-202ENST00000469928 248 ntBASIC2.58□□□□□ -2
CLDN4O14493 AL163973.1-201ENST00000484753 577 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms