Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC188H7C350 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.58□□□□□ -2
CCDC188H7C350 OR4G2P-201ENST00000328113 903 ntBASIC2.58□□□□□ -2
CCDC188H7C350 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC188H7C350 Y_RNA.51-201ENST00000362725 102 ntBASIC2.58□□□□□ -2
CCDC188H7C350 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.58□□□□□ -2
CCDC188H7C350 MTCO3P30-201ENST00000426425 670 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AL451074.3-201ENST00000437709 472 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AC132479.1-201ENST00000449160 144 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AC093534.1-201ENST00000504977 132 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.58□□□□□ -2
CCDC188H7C350 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.58□□□□□ -2
CCDC188H7C350 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.58□□□□□ -2
CCDC188H7C350 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.58□□□□□ -2
CCDC188H7C350 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC188H7C350 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.58□□□□□ -2
CCDC188H7C350 AC007684.1-201ENST00000609671 477 ntBASIC2.58□□□□□ -2
CCDC188H7C350 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC188H7C350 uc_338.11-201ENST00000619132 160 ntBASIC2.58□□□□□ -2
CCDC188H7C350 U4.3-201ENST00000621047 82 ntBASIC2.58□□□□□ -2
CCDC188H7C350 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.58□□□□□ -2
CCDC188H7C350 MTND4P14-201ENST00000435799 1354 ntBASIC2.58□□□□□ -2
CCDC188H7C350 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
CCDC188H7C350 RNU6-1120P-201ENST00000362988 108 ntBASIC2.57□□□□□ -2
CCDC188H7C350 RNU6-45P-201ENST00000384471 107 ntBASIC2.57□□□□□ -2
CCDC188H7C350 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AL360182.1-201ENST00000397433 468 ntBASIC2.57□□□□□ -2
CCDC188H7C350 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC188H7C350 GSTA9P-201ENST00000406231 611 ntBASIC2.57□□□□□ -2
CCDC188H7C350 RAP1BP3-201ENST00000407180 549 ntBASIC2.57□□□□□ -2
CCDC188H7C350 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.57□□□□□ -2
CCDC188H7C350 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.57□□□□□ -2
CCDC188H7C350 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
CCDC188H7C350 HMGB1P31-201ENST00000437242 427 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.57□□□□□ -2
CCDC188H7C350 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.57□□□□□ -2
CCDC188H7C350 MTND3P25-201ENST00000509243 135 ntBASIC2.57□□□□□ -2
CCDC188H7C350 FAM92A1P1-201ENST00000528023 890 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.57□□□□□ -2
CCDC188H7C350 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.57□□□□□ -2
CCDC188H7C350 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.57□□□□□ -2
CCDC188H7C350 MTCYBP33-201ENST00000575007 1130 ntBASIC2.57□□□□□ -2
CCDC188H7C350 MIR4703-201ENST00000577728 79 ntBASIC2.57□□□□□ -2
CCDC188H7C350 MTND1P15-201ENST00000579262 949 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AC138761.3-201ENST00000579993 334 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.57□□□□□ -2
CCDC188H7C350 AC025449.1-201ENST00000603896 529 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AC096772.1-201ENST00000609146 564 ntBASIC2.57□□□□□ -2
CCDC188H7C350 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.57□□□□□ -2
CCDC188H7C350 MIR3529-201ENST00000637713 78 ntBASIC2.57□□□□□ -2
CCDC188H7C350 ZNF680P1-201ENST00000436625 1469 ntBASIC2.57□□□□□ -2
CCDC188H7C350 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC188H7C350 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC188H7C350 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
CCDC188H7C350 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
CCDC188H7C350 RNU6-715P-201ENST00000365204 103 ntBASIC2.56□□□□□ -2
CCDC188H7C350 RNU6-1119P-201ENST00000384349 108 ntBASIC2.56□□□□□ -2
CCDC188H7C350 SNORD116-20-201ENST00000384529 92 ntBASIC2.56□□□□□ -2
CCDC188H7C350 RNU6-606P-201ENST00000384721 111 ntBASIC2.56□□□□□ -2
CCDC188H7C350 DEFB108C-201ENST00000400154 252 ntBASIC2.56□□□□□ -2
CCDC188H7C350 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.56□□□□□ -2
CCDC188H7C350 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AL031779.1-201ENST00000415663 330 ntBASIC2.56□□□□□ -2
CCDC188H7C350 AC097463.2-201ENST00000421074 142 ntBASIC2.56□□□□□ -2
CCDC188H7C350 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.56□□□□□ -2
CCDC188H7C350 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.56□□□□□ -2
CCDC188H7C350 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AC074344.1-201ENST00000512823 224 ntBASIC2.56□□□□□ -2
CCDC188H7C350 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
CCDC188H7C350 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.56□□□□□ -2
CCDC188H7C350 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.56□□□□□ -2
CCDC188H7C350 RPL7P20-201ENST00000520308 745 ntBASIC2.56□□□□□ -2
CCDC188H7C350 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC188H7C350 AC135279.1-201ENST00000543493 504 ntBASIC2.56□□□□□ -2
CCDC188H7C350 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 BNIP3P6-201ENST00000549284 499 ntBASIC2.56□□□□□ -2
CCDC188H7C350 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AC004223.2-201ENST00000590309 544 ntBASIC2.56□□□□□ -2
CCDC188H7C350 AC093788.1-201ENST00000609356 927 ntBASIC2.56□□□□□ -2
CCDC188H7C350 MIR7106-201ENST00000612419 65 ntBASIC2.56□□□□□ -2
CCDC188H7C350 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.56□□□□□ -2
CCDC188H7C350 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.56□□□□□ -2
CCDC188H7C350 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.56□□□□□ -2
CCDC188H7C350 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.56□□□□□ -2
CCDC188H7C350 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
CCDC188H7C350 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
CCDC188H7C350 SNORA44-201ENST00000384584 132 ntBASIC2.55□□□□□ -2
CCDC188H7C350 SNORD37.1-201ENST00000390968 65 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AL591416.1-201ENST00000404015 867 ntBASIC2.55□□□□□ -2
CCDC188H7C350 CIR1P3-201ENST00000405137 479 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RPS4XP7-201ENST00000406274 780 ntBASIC2.55□□□□□ -2
CCDC188H7C350 RNU4-55P-201ENST00000410731 137 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AL663109.1-201ENST00000411498 844 ntBASIC2.55□□□□□ -2
CCDC188H7C350 AF274854.1-201ENST00000413236 615 ntBASIC2.55□□□□□ -2
CCDC188H7C350 UBE2V1P10-201ENST00000414685 269 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms