Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC005771.1-201ENST00000585581 349 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC009977.1-201ENST00000586015 570 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC022022.2-201ENST00000602989 360 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 SRGNP1-201ENST00000603392 451 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC007621.1-201ENST00000604544 437 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC103810.6-201ENST00000606708 136 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC026585.1-201ENST00000619582 524 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 RMST_7.1-201ENST00000621935 268 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC025034.2-201ENST00000623264 286 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC091932.3-201ENST00000624223 323 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC019226.2-201ENST00000625973 424 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 MTND4P1-201ENST00000457501 1466 ntBASIC1.6□□□□□ -2.15
SMKR1H3BMG3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMKR1H3BMG3 AC016717.2-201ENST00000609089 5141 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 RNU6-179P-201ENST00000363350 107 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 MIR29B2-201ENST00000385055 81 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 MIR29C-201ENST00000385231 88 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC010099.3-201ENST00000423896 409 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 HMGB1P31-201ENST00000437242 427 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC245102.2-201ENST00000448956 180 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 snoU109.1-201ENST00000459339 135 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 RPL30P6-201ENST00000475925 342 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC126389.1-201ENST00000477436 290 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 SLC25A15P5-201ENST00000508033 253 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC234781.5-201ENST00000508429 271 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC117532.1-201ENST00000514638 323 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 FABP5P5-201ENST00000515537 406 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 RNU2-46P-201ENST00000517038 113 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC090616.2-202ENST00000584248 222 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC002984.1-201ENST00000591692 448 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 Z82243.1-201ENST00000609432 473 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AL132822.1-201ENST00000617063 513 ntBASIC1.59□□□□□ -2.15
SMKR1H3BMG3 AC002543.1-201ENST00000299783 1954 ntBASIC1.59□□□□□ -2.16
SMKR1H3BMG3 CENPCP1-201ENST00000533085 2578 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 SNORD56.1-201ENST00000362913 68 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 RNU6-169P-201ENST00000365336 107 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 SNORA67.4-201ENST00000384688 142 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 HMGN2P19-201ENST00000425149 265 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 MTND2P29-201ENST00000438595 412 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 RPS3AP12-201ENST00000443616 753 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AL591719.1-201ENST00000444669 744 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC025033.1-201ENST00000463883 194 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 RPL23AP42-201ENST00000471152 471 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 RAP1BP2-201ENST00000478270 544 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC116562.3-201ENST00000506136 177 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 RNU6-685P-201ENST00000517088 95 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC068587.5-201ENST00000528506 175 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 OR5AL2P-201ENST00000532185 920 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC009094.1-201ENST00000564443 426 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 MIR5002-201ENST00000584713 97 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AL121992.2-201ENST00000606262 256 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AL133173.2-201ENST00000614270 90 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AC005296.1-201ENST00000616145 209 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 AL359740.1-201ENST00000624340 592 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 MTND4P4-201ENST00000439033 1366 ntBASIC1.58□□□□□ -2.16
SMKR1H3BMG3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
SMKR1H3BMG3 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 SNORD115-3-201ENST00000363100 82 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 RNU6-944P-201ENST00000364023 107 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL356432.1-201ENST00000405809 419 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 OR9R1P-201ENST00000412200 877 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC244636.1-201ENST00000421152 228 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 CALM2P2-201ENST00000428512 440 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 MTATP6P16-201ENST00000434543 526 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC104850.1-201ENST00000435940 476 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 S100A11P2-201ENST00000467589 312 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 RPL30P12-201ENST00000474666 353 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC079804.2-201ENST00000490376 200 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 MTCO3P9-201ENST00000506989 781 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms