Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL353621.1-201ENST00000418219 243 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 TOMM20P4-201ENST00000427861 435 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AL606489.2-201ENST00000433886 234 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 FABP5P14-201ENST00000437273 393 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC008571.1-201ENST00000467232 300 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RPL9P6-201ENST00000492764 598 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 MTCO3P9-201ENST00000506989 781 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC074344.1-201ENST00000512823 224 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 RN7SKP219-201ENST00000516825 296 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AP005435.4-201ENST00000529514 284 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 MIR4765-201ENST00000585007 77 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 AC092608.2-201ENST00000624427 218 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 MTND4P14-201ENST00000435799 1354 ntBASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA3F8WFD2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNU4-82P-201ENST00000362443 140 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNU6-623P-201ENST00000363143 105 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNU6-996P-201ENST00000365438 107 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNU6-72P-201ENST00000384285 79 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 MIR218-1-201ENST00000384999 110 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 SNORD70.1-201ENST00000391007 85 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RNU6-903P-201ENST00000391270 109 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 CIR1P3-201ENST00000405137 479 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 HMGN2P35-201ENST00000412164 270 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AL669831.1-202ENST00000428504 417 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 GTF2IP13-201ENST00000438487 386 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 SNRPFP3-201ENST00000457792 225 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AP000852.1-201ENST00000472460 573 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RPL23AP11-201ENST00000475260 469 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 MRPL42P6-201ENST00000486397 371 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC011005.2-201ENST00000487324 359 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 RPL37P25-201ENST00000507308 276 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 Y_RNA.687-201ENST00000516558 91 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 BNIP3P6-201ENST00000549284 499 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AP001596.2-201ENST00000608410 312 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC124864.2-201ENST00000624736 186 ntBASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.45□□□□□ -2.02
NPIPA3F8WFD2 AC080128.1-201ENST00000474389 1917 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RNU6-552P-201ENST00000362869 119 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RNU6-517P-201ENST00000384362 110 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RNU6-393P-201ENST00000384475 107 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RNU6-748P-201ENST00000384648 107 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AL139095.1-201ENST00000404326 391 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RNU2-25P-201ENST00000411041 191 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC092427.1-202ENST00000430569 476 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 RPS29P6-201ENST00000438196 145 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AL445687.1-201ENST00000439946 251 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 CALM1P1-201ENST00000442082 433 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 SCARNA18-201ENST00000459004 134 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 SRRM1P2-201ENST00000464531 1192 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 GMFBP1-201ENST00000467831 427 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 MTAPP1-201ENST00000489154 819 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC010486.1-201ENST00000511793 424 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 AC096725.1-201ENST00000514266 313 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 SNORA25.11-201ENST00000515935 105 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 OR5AQ1P-201ENST00000527596 927 ntBASIC2.44□□□□□ -2.02
NPIPA3F8WFD2 MIR3199-1-201ENST00000582434 88 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms