Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC145146.1-201ENST00000496370 254 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AL133241.1-201ENST00000556832 487 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 EIF1P4-201ENST00000572664 335 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC093838.1-201ENST00000613014 469 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC138393.1-203ENST00000327086 343 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
COL6A5A8TX70 MICF-203ENST00000432679 129 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 ARPC3P5-201ENST00000448802 534 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 TPMTP4-201ENST00000450749 678 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 HMGB1P36-201ENST00000487709 576 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AL133373.1-201ENST00000497098 94 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.13□□□□□ -2.39
COL6A5A8TX70 SNORD116-28-201ENST00000516123 91 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 RNA5SP180-201ENST00000516181 101 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 AC091805.2-201ENST00000603848 235 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 RN7SL660P-201ENST00000614852 299 ntBASIC0.13□□□□□ -2.39
COL6A5A8TX70 MIR493-201ENST00000385254 89 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC023141.4-201ENST00000412031 328 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL6A5A8TX70 BPY2DP-201ENST00000422208 265 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 OR51AB1P-201ENST00000429046 620 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 RAP1BP2-201ENST00000478270 544 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 RN7SKP287-201ENST00000516546 266 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 SNRPGP16-201ENST00000533275 226 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC113194.1-201ENST00000606037 500 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AL662814.1-201ENST00000617364 121 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL6A5A8TX70 AL596211.1-201ENST00000569873 2277 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 RNU6-26P-201ENST00000383985 107 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 ZNF863P-201ENST00000426746 417 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC093106.2-201ENST00000428212 385 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL6A5A8TX70 RPS15AP5-201ENST00000436276 388 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 RPS26P55-201ENST00000471178 356 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC136618.2-201ENST00000575091 400 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AL121992.2-201ENST00000606262 256 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 MIR8064-201ENST00000612863 90 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 AC095031.1-201ENST00000623685 672 ntBASIC0.12□□□□□ -2.39
COL6A5A8TX70 Y_RNA.346-201ENST00000365385 112 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 RNU6-1328P-201ENST00000410938 106 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 RPL7L1P10-201ENST00000427790 463 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 RPS26P45-201ENST00000471748 340 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 AL359212.1-201ENST00000556608 614 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 AL355810.1-201ENST00000614629 552 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 AC008443.7-201ENST00000622195 246 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 RNU6-370P-201ENST00000411008 104 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 AC087897.1-201ENST00000550134 156 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.11□□□□□ -2.39
COL6A5A8TX70 AC069304.3-201ENST00000603938 1084 ntBASIC0.11□□□□□ -2.39
COL6A5A8TX70 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.11□□□□□ -2.39
COL6A5A8TX70 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 ACA64.5-201ENST00000516207 127 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 MIR5093-201ENST00000583199 100 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 HMGN2P15-201ENST00000585707 270 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 AC004492.1-201ENST00000607036 742 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 AL591926.4-201ENST00000616895 298 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 SNORD114-16-201ENST00000363044 70 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 AP000797.1-201ENST00000478870 387 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 COX6CP6-201ENST00000490840 228 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 SNORA31.8-201ENST00000516327 108 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 RNU2-12P-201ENST00000517216 168 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 RNA5SP291-201ENST00000517222 105 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 MIR3126-201ENST00000577443 74 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.1□□□□□ -2.39
COL6A5A8TX70 ZNF663P-202ENST00000641770 1131 ntBASIC0.1□□□□□ -2.39
COL6A5A8TX70 MTND4P16-201ENST00000466108 1367 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 AL138713.1-201ENST00000624026 2130 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 MIR424-201ENST00000362227 98 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 RNA5SP93-201ENST00000362525 114 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 MTCYBP24-201ENST00000420387 1106 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.09□□□□□ -2.39
COL6A5A8TX70 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.39
COL6A5A8TX70 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.09□□□□□ -2.39
COL6A5A8TX70 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.09□□□□□ -2.39
COL6A5A8TX70 RNU6-902P-201ENST00000517212 91 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 AC010329.5-201ENST00000623497 2174 ntBASIC0.09□□□□□ -2.39
COL6A5A8TX70 RNU6-1155P-201ENST00000363554 107 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms