Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 MTND5P30-201ENST00000452896 1731 ntBASIC3.9□□□□□ -1.79
CCDC163A0A0D9SF12 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 RNU1-15P-201ENST00000353977 144 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-942P-201ENST00000363002 107 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-105P-201ENST00000363909 104 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.463-201ENST00000384271 102 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 MIR195-201ENST00000385194 87 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 NDUFB4P4-201ENST00000404822 243 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AL160004.2-201ENST00000432935 350 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AC013470.1-201ENST00000453438 462 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 SNORD105B-201ENST00000458770 79 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 MRPL42P6-201ENST00000486397 371 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.711-201ENST00000516993 102 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 IGHV3-76-201ENST00000522465 295 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 CBX3P8-201ENST00000532412 525 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 MIR8076-201ENST00000611401 83 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 AC006157.1-201ENST00000611750 366 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 HMGB1P24-202ENST00000615653 685 ntBASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC163A0A0D9SF12 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-490P-201ENST00000362985 107 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 MIR218-2-201ENST00000385006 110 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 MIR199A2-201ENST00000385289 110 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 HDGFP1-201ENST00000405943 252 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 SNORA3C-201ENST00000408792 125 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RNU6-174P-201ENST00000410406 106 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 PMCHL1-202ENST00000423102 261 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AL137792.2-201ENST00000443484 235 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC069499.1-201ENST00000489433 509 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 DEFB109F-201ENST00000491870 277 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC104619.4-201ENST00000510773 249 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RN7SKP295-201ENST00000517264 153 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC006199.1-201ENST00000548728 219 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RPL21P7-201ENST00000557463 483 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC006504.6-201ENST00000590142 199 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC005046.1-201ENST00000608515 625 ntBASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC163A0A0D9SF12 AC103988.1-201ENST00000566382 2177 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.5-201ENST00000362334 102 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.123-201ENST00000363338 102 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 U3.6-201ENST00000363622 211 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 Y_RNA.533-201ENST00000384596 114 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 MIR606-201ENST00000384851 96 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 BTF3L4P2-201ENST00000392798 346 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 RNU2-49P-201ENST00000410666 184 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AL714022.1-201ENST00000439897 151 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 AL035666.1-201ENST00000446195 348 ntBASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC163A0A0D9SF12 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms