Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 Z99129.1-201ENST00000612510 255 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC011155.2-201ENST00000623202 216 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 U6.99-201ENST00000637524 83 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC093536.2-201ENST00000565257 1406 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 AC103710.2-202ENST00000641454 2853 ntBASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV40A0A0B4J280 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AL139276.1-201ENST00000311910 1001 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-898P-201ENST00000365627 104 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-166P-201ENST00000384371 107 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-456P-201ENST00000384493 107 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU2-66P-201ENST00000410650 161 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AL365338.1-201ENST00000422282 858 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC137499.1-201ENST00000427602 88 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC133104.1-201ENST00000429100 218 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AL360271.2-201ENST00000447710 161 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC132479.1-201ENST00000449160 144 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AL583843.1-201ENST00000456070 346 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 snoU109.2-201ENST00000459316 135 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC006512.1-201ENST00000468816 291 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RPL21P99-201ENST00000480369 423 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC104435.1-201ENST00000483483 166 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MTND2P33-201ENST00000506452 1031 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC117522.1-201ENST00000509821 380 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-1315P-201ENST00000517187 99 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MTCO2P4-201ENST00000517968 247 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 IGLV3-17-201ENST00000519099 244 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AP000889.2-201ENST00000532684 490 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 SUB1P2-201ENST00000556401 297 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MIR4775-201ENST00000581168 75 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MIR3682-201ENST00000581338 84 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC020895.1-201ENST00000595362 272 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AL670379.4-201ENST00000605279 254 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 MIR6895-201ENST00000613497 78 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC009090.3-201ENST00000616553 565 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC024940.5-201ENST00000622889 474 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AC092656.1-203ENST00000624134 423 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AP003399.1-201ENST00000637534 361 ntBASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
TRAV40A0A0B4J280 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 OR56A5-201ENST00000340110 738 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RNY1P12-201ENST00000364251 105 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 Y_RNA.409-201ENST00000383990 98 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-116P-201ENST00000384042 109 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 SNORA51.11-201ENST00000384442 131 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MIR518D-201ENST00000385014 87 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MIR767-201ENST00000390228 109 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AL133475.1-201ENST00000404414 305 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC016831.2-201ENST00000417179 352 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 PIGFP2-201ENST00000421400 651 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 C8orf59P1-201ENST00000429930 303 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 GPR143P-201ENST00000434155 205 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC092001.1-201ENST00000453012 261 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 MTCO2P18-201ENST00000457151 658 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC092798.1-201ENST00000458542 409 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RNU6-953P-201ENST00000459154 107 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RPL23AP70-201ENST00000483361 460 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC112206.3-201ENST00000514578 389 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RNU1-86P-201ENST00000516108 154 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 RNU1-107P-201ENST00000516617 154 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC022634.1-201ENST00000520765 532 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 FAM92A1P1-201ENST00000528023 890 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC006199.1-201ENST00000548728 219 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AL157871.3-201ENST00000557231 293 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC021739.1-201ENST00000559631 174 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AGGF1P4-201ENST00000568249 801 ntBASIC1.69□□□□□ -2.14
TRAV40A0A0B4J280 AC103810.1-201ENST00000579873 453 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms