Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC104806.1-201ENST00000508720 308 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 RNU4-18P-201ENST00000516751 149 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 CR383656.7-201ENST00000548164 174 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AL671309.1-201ENST00000603750 544 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AL031176.1-201ENST00000604554 466 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 AL109620.1-201ENST00000618738 1197 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 MTND1P37-201ENST00000636562 264 ntBASIC0.09□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-112P-201ENST00000363599 104 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 MIR200A-201ENST00000384875 90 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 MIR1302-8-201ENST00000408342 128 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 USP9YP19-201ENST00000412165 485 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL161935.2-201ENST00000414627 60 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 USP9YP13-201ENST00000417797 480 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 PTGES3P4-201ENST00000426243 356 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 RPP40P1-201ENST00000426762 456 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-405P-201ENST00000516637 110 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-467P-201ENST00000517027 110 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC109329.1-201ENST00000518744 317 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL590705.4-201ENST00000532209 134 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL132857.1-201ENST00000555180 708 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 Z69720.2-201ENST00000624755 279 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL589743.1-201ENST00000551932 2712 ntBASIC0.08□□□□□ -2.4
TRAV21A0A0B4J279 AL391994.1-201ENST00000254724 282 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 Y_RNA.255-201ENST00000364581 97 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 RPL21P1-201ENST00000399532 476 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 SNX2P2-201ENST00000424553 323 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 SKA2P1-201ENST00000425592 390 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC007919.1-201ENST00000429380 217 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 FTH1P12-201ENST00000432137 551 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 RPS20P10-201ENST00000451209 253 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 RNA5SP168-201ENST00000516642 112 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 SNORA70.22-201ENST00000517160 124 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC012213.3-201ENST00000577199 777 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 KATNBL1P5-201ENST00000605015 517 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC017083.3-201ENST00000609955 700 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AL158163.2-201ENST00000619110 700 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 U2.21-201ENST00000637295 81 ntBASIC0.07□□□□□ -2.4
TRAV21A0A0B4J279 Y_RNA.4-201ENST00000362333 112 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNA5SP193-201ENST00000410353 107 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNU2-47P-201ENST00000410649 186 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNU2-7P-201ENST00000410794 178 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 MTCO2P12-201ENST00000427426 682 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 FO393419.3-201ENST00000428741 282 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 HSPE1P9-201ENST00000440046 311 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC010631.1-201ENST00000474150 156 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RPL30P1-201ENST00000488676 339 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC084024.2-201ENST00000503480 791 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC074344.1-201ENST00000512823 224 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-1092P-201ENST00000516955 87 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC092451.2-201ENST00000538746 658 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AP000763.2-201ENST00000540641 163 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC006270.3-201ENST00000605967 1036 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 AC068205.3-201ENST00000636385 468 ntBASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-349P-201ENST00000362402 107 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 RNU4-12P-201ENST00000365233 139 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-152P-201ENST00000384037 107 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-167P-201ENST00000384292 106 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 RNU6-360P-201ENST00000390944 104 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 MTCO1P56-201ENST00000401674 224 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 RPL36AP53-201ENST00000432891 316 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 TIMM9P1-201ENST00000436122 256 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 PTGES3P1-201ENST00000439531 483 ntBASIC0.05□□□□□ -2.4
TRAV21A0A0B4J279 GAPDHP17-201ENST00000449858 1001 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms