Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-985P-201ENST00000410182 104 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU2-68P-201ENST00000410878 191 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU6-1304P-201ENST00000411374 106 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 CBX3P6-201ENST00000430257 527 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 SNRPEP9-201ENST00000436794 238 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 HMGB1P30-201ENST00000492455 606 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC022493.1-201ENST00000492984 337 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU1-103P-201ENST00000516502 125 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 CYCSP27-201ENST00000527643 293 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL670379.10-201ENST00000604330 253 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 NUTF2P8-201ENST00000604593 363 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC004805.2-201ENST00000605382 482 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL670379.9-201ENST00000605428 253 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 BRDTP1-201ENST00000605735 677 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AC099506.2-201ENST00000623074 221 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
CCDC187A0A096LP49 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC187A0A096LP49 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CCDC187A0A096LP49 FAM35BP-202ENST00000497389 3337 ntBASIC3.34□□□□□ -1.88
CCDC187A0A096LP49 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RNU6-217P-201ENST00000384164 104 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1179P-201ENST00000384667 107 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 HMGN2P8-201ENST00000391458 268 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 MIR548F5-201ENST00000408421 86 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RNU6-370P-201ENST00000411008 104 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AL353621.1-201ENST00000418219 243 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AC006028.1-201ENST00000438379 402 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 MRPS31P2-201ENST00000451581 518 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 MTCO3P10-201ENST00000455912 772 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 MTND3P25-201ENST00000509243 135 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AC006445.2-201ENST00000510061 472 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 FCF1P8-201ENST00000510322 597 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 LRRC37A5P-203ENST00000580181 585 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AL138880.2-201ENST00000616214 239 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 AC098657.3-201ENST00000620434 263 ntBASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC187A0A096LP49 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 Z83843.1-201ENST00000604070 3685 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.5-201ENST00000362334 102 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1115P-201ENST00000362490 106 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1188P-201ENST00000363795 107 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 MIR1302-3-201ENST00000408128 138 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RNU6-607P-201ENST00000411283 108 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC018865.2-201ENST00000423631 129 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 USP9YP16-201ENST00000430287 407 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 USP9YP23-201ENST00000455085 407 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RPL23AP14-201ENST00000468281 468 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 HMGN2P13-201ENST00000476476 274 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 TBCAP3-201ENST00000512475 312 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.682-201ENST00000516457 100 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1069P-201ENST00000516612 133 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AP000889.2-201ENST00000532684 490 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 IMMP1LP2-201ENST00000552954 492 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 TRAV37-201ENST00000553906 342 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 AC026470.2-201ENST00000561492 181 ntBASIC3.32□□□□□ -1.88
CCDC187A0A096LP49 MIR5680-201ENST00000577577 84 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms