Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC011005.2-201ENST00000487324 359 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 COX6CP6-201ENST00000490840 228 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 RNA5SP290-201ENST00000517133 127 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 MTATP6P3-201ENST00000581686 676 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 AC079416.3-201ENST00000624479 549 ntBASIC0.34□□□□□ -2.36
TRAV30A0A087WSZ9 SNORD114-22-201ENST00000365423 72 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC119751.3-201ENST00000399720 670 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC134050.1-201ENST00000495088 933 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-840P-201ENST00000517275 65 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 MIR4781-201ENST00000585250 76 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 CLIC4P2-201ENST00000601934 717 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AL355598.1-201ENST00000604169 202 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AL132822.1-201ENST00000617063 513 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-23P-201ENST00000363283 107 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-112P-201ENST00000363599 104 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 Y_RNA.255-201ENST00000364581 97 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC114482.1-201ENST00000418010 247 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AL589872.1-201ENST00000426602 288 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 KATNBL1P3-201ENST00000443475 909 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC013267.1-201ENST00000458227 267 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 RPL30P1-201ENST00000488676 339 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC005951.2-201ENST00000576282 495 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC016727.2-201ENST00000603988 621 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC104465.1-201ENST00000611365 139 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC138627.2-201ENST00000624202 601 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AL359740.1-201ENST00000624340 592 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
TRAV30A0A087WSZ9 AC092447.10-201ENST00000620607 1652 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-546P-201ENST00000383991 107 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-1235P-201ENST00000384559 107 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 MIR605-201ENST00000385078 83 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 SNX2P2-201ENST00000424553 323 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC234064.1-201ENST00000436312 247 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-498P-201ENST00000459468 107 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RPS29P1-201ENST00000465274 159 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 MTCO2P15-201ENST00000532655 656 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC008127.2-201ENST00000549925 1075 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC015688.6-201ENST00000577737 104 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 RPL30P11-203ENST00000598995 310 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 MIR6788-201ENST00000618842 66 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 AC009541.1-201ENST00000438279 2662 ntBASIC0.31□□□□□ -2.36
TRAV30A0A087WSZ9 Y_RNA.99-201ENST00000363138 105 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-360P-201ENST00000390944 104 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC010099.3-201ENST00000423896 409 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AL591212.2-201ENST00000433923 257 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AP003392.2-201ENST00000527269 208 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 MIR4452-201ENST00000583004 71 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AP003465.2-201ENST00000602571 373 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 AL603758.1-201ENST00000618654 241 ntBASIC0.3□□□□□ -2.36
TRAV30A0A087WSZ9 OR4G2P-201ENST00000328113 903 ntBASIC0.29□□□□□ -2.36
TRAV30A0A087WSZ9 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TRAV30A0A087WSZ9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV30A0A087WSZ9 MTCYBP43-201ENST00000513621 740 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms