Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC021231.3-201ENST00000558497 370 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR5047-201ENST00000579212 100 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR3934-201ENST00000579806 107 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR4765-201ENST00000585007 77 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 KLKP1-201ENST00000595979 403 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AC008739.2-201ENST00000597006 317 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 uc_338.22-201ENST00000622722 187 ntBASIC5.25□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.202-201ENST00000364083 110 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU4-56P-201ENST00000364700 142 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU4-9P-201ENST00000364951 139 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-1286P-201ENST00000383871 107 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.463-201ENST00000384271 102 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.504-201ENST00000384481 104 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.577-201ENST00000384794 101 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 EI24P2-201ENST00000397776 1076 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC011933.1-201ENST00000413334 321 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC243428.1-201ENST00000421099 264 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC091286.1-201ENST00000431233 461 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 GOT2P5-201ENST00000433995 546 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 HMGB1P37-201ENST00000439613 609 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RPL12P11-201ENST00000439970 501 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AF213884.1-201ENST00000488102 463 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU7-175P-201ENST00000515915 61 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 SNORD116.3-201ENST00000517176 78 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-988P-201ENST00000519081 107 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RN7SL690P-201ENST00000582087 240 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 AC060766.3-201ENST00000591442 263 ntBASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GTF3C3Q9Y5Q9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-1285P-201ENST00000363480 105 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.252-201ENST00000364556 101 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC007098.1-201ENST00000420122 367 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC006011.1-201ENST00000442758 349 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL137792.2-201ENST00000443484 235 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL353705.4-201ENST00000449661 238 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 MRPS36P2-201ENST00000512569 299 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 RNA5SP112-201ENST00000515937 99 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-567P-201ENST00000516746 107 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC079598.5-201ENST00000547460 117 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 MIR3136-201ENST00000583498 78 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL158827.2-201ENST00000602494 330 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL133393.1-201ENST00000603277 287 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 SNRPGP17-201ENST00000603780 214 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL590392.1-201ENST00000604960 446 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC005014.2-201ENST00000607795 599 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AC007742.2-201ENST00000618226 398 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL691447.3-201ENST00000635020 330 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 AL353743.1-202ENST00000431724 1695 ntBASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
GTF3C3Q9Y5Q9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RPL23P2-201ENST00000320371 421 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 OR56A5-201ENST00000340110 738 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-1115P-201ENST00000362490 106 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-474P-201ENST00000384243 107 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC097463.2-201ENST00000421074 142 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 FTH1P2-201ENST00000466086 412 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RPS4XP22-201ENST00000480755 780 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RPL30P10-201ENST00000488148 337 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 RNU6-699P-201ENST00000517081 110 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 IGHV3-76-201ENST00000522465 295 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AP001781.1-201ENST00000530977 207 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC020661.2-201ENST00000560114 134 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 AC011471.1-201ENST00000585766 187 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.812-201ENST00000610788 101 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.784-201ENST00000613803 101 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.787-201ENST00000616522 101 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.780-201ENST00000617336 101 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 Y_RNA.801-201ENST00000619005 101 ntBASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GTF3C3Q9Y5Q9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms