Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 MTCO2P11-201ENST00000431069 680 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AL358934.1-201ENST00000432346 324 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 ANXA2P1-201ENST00000505539 926 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC116655.1-201ENST00000508324 901 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC105313.1-201ENST00000509121 353 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 MIR4524B-201ENST00000581569 115 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 MIR3611-201ENST00000584484 83 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC008121.1-201ENST00000603244 268 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC126118.1-201ENST00000607744 628 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC004908.3-201ENST00000610248 625 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 AC024940.5-201ENST00000622889 474 ntBASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
PCDHGA1Q9Y5H4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 SNORD115-7-201ENST00000365306 82 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-456P-201ENST00000384493 107 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 MIR454-201ENST00000390180 115 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 CISD1P1-201ENST00000393907 327 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 OR51A5P-201ENST00000415429 942 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AL031779.1-201ENST00000415663 330 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AL135786.1-201ENST00000415892 214 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC007560.1-201ENST00000426912 237 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AL122001.1-201ENST00000457027 370 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC022364.2-201ENST00000457963 554 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC023194.1-201ENST00000493084 308 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 SNORA31.6-201ENST00000516241 130 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 SNORA31.19-201ENST00000517079 126 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-685P-201ENST00000517088 95 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 MIR5571-201ENST00000577998 113 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 MIR4775-201ENST00000581168 75 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC023043.3-201ENST00000593113 385 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 Z84480.1-201ENST00000605131 311 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC087045.1-201ENST00000605856 382 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC136475.10-201ENST00000620253 385 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC244517.12-201ENST00000623581 663 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC009161.2-201ENST00000624626 138 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
PCDHGA1Q9Y5H4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-166P-201ENST00000384371 107 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AL356057.3-201ENST00000402607 340 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 RPS4XP7-201ENST00000406274 780 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 SNORD88.1-201ENST00000408684 91 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 BTF3L4P1-201ENST00000413813 468 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC112220.1-201ENST00000434628 355 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 RPS15AP9-201ENST00000439856 381 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 TPT1P7-201ENST00000458300 517 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 AC022493.1-201ENST00000492984 337 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.56□□□□□ -2
PCDHGA1Q9Y5H4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms