Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC016831.2-201ENST00000417179 352 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AP000907.1-201ENST00000428428 510 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 Y_RNA.632-201ENST00000459189 102 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 RN7SL293P-201ENST00000481765 281 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC104619.4-201ENST00000510773 249 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-1016P-201ENST00000516689 94 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC104576.1-201ENST00000524225 88 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC093027.1-201ENST00000546698 429 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 HMGN2P15-201ENST00000585707 270 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC018889.1-201ENST00000605372 397 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC124303.1-201ENST00000605703 360 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC019193.3-201ENST00000609144 554 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC126177.8-201ENST00000618339 1015 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR7153-201ENST00000637758 57 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC073346.2-201ENST00000624724 2058 ntBASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
PCDHGA3Q9Y5H0 AC004944.1-201ENST00000517807 3059 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU1-105P-201ENST00000363470 161 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORD73A-201ENST00000386062 65 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-954P-201ENST00000411355 107 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AL030996.1-201ENST00000411430 235 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC245054.2-201ENST00000415639 319 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 DAP3P1-201ENST00000441522 278 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 RPS3AP46-201ENST00000448352 682 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC012308.1-201ENST00000451232 178 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 RPS29P20-201ENST00000489592 171 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AK3P2-201ENST00000507976 429 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORA43.2-201ENST00000516652 128 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC022634.1-201ENST00000520765 532 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 CR383656.8-201ENST00000549046 145 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 FRG2DP-202ENST00000566967 323 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC064836.2-201ENST00000609491 462 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 PISRT1.1-201ENST00000616930 107 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AL591424.2-201ENST00000617023 128 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR7975-201ENST00000619350 68 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGA3Q9Y5H0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-78P-201ENST00000362897 107 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-525P-201ENST00000363685 104 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-827P-201ENST00000365553 106 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR218-2-201ENST00000385006 110 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RNA5SP252-201ENST00000391131 119 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AC096649.2-201ENST00000416186 393 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AL117339.3-201ENST00000418733 162 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RPS15AP5-201ENST00000436276 388 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AL441985.1-201ENST00000457727 251 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 SNORD19B-201ENST00000459623 84 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 MTND4P17-201ENST00000470444 350 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AC116655.1-201ENST00000508324 901 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 AL161423.1-201ENST00000613700 262 ntBASIC3.59□□□□□ -1.83
PCDHGA3Q9Y5H0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms