Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-738P-201ENST00000384531 106 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-308P-201ENST00000390957 107 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AL445529.1-201ENST00000398713 389 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC245054.2-201ENST00000415639 319 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 Z82205.1-201ENST00000428456 297 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC128713.1-201ENST00000471495 306 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RN7SKP57-201ENST00000517248 293 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 APOOP3-201ENST00000536787 586 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 ELOCP5-201ENST00000604924 333 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AC133104.2-201ENST00000615272 193 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 AL138880.2-201ENST00000616214 239 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 MTND4P27-201ENST00000450813 1354 ntBASIC3.59□□□□□ -1.83
PCDHB1Q9Y5F3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB1Q9Y5F3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB1Q9Y5F3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.59□□□□□ -1.84
PCDHB1Q9Y5F3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AL136164.4-201ENST00000625013 2135 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AP001148.1-201ENST00000624124 2359 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-37P-201ENST00000362692 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-11P-201ENST00000364234 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-7-201ENST00000364784 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-8-201ENST00000365467 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-25P-201ENST00000383873 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1-201ENST00000383898 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-48P-201ENST00000384161 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-36P-201ENST00000384172 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-4P-201ENST00000384205 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-5P-201ENST00000384238 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-3P-201ENST00000384314 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-16P-201ENST00000384385 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-15P-201ENST00000384534 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-658P-201ENST00000384606 106 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-2-201ENST00000384627 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-29P-201ENST00000384637 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-9-201ENST00000384776 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-33P-201ENST00000384793 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 MIR559-201ENST00000385188 96 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNY4P36-201ENST00000391116 96 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AP000567.1-201ENST00000406413 156 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 U3.39-201ENST00000408569 239 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC006026.2-201ENST00000457376 180 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RN7SL601P-201ENST00000471221 293 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-928P-201ENST00000516876 104 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AL163153.1-201ENST00000554223 283 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC008121.1-201ENST00000603244 268 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 CYP2C61P-201ENST00000604072 290 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC006077.1-201ENST00000604746 343 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 RNU6-6P-201ENST00000606623 107 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 MIR8058-201ENST00000615737 89 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 AC098657.3-201ENST00000620434 263 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 SCARNA4-202ENST00000625402 129 ntBASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHB1Q9Y5F3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RNA5SP295-201ENST00000362655 121 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RNA5SP42-201ENST00000364278 115 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 SNORA48.2-201ENST00000390926 124 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 SNORD56-201ENST00000413522 71 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHB1Q9Y5F3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms