Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC105129.3-201ENST00000605455 485 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 AC090970.3-201ENST00000612566 866 ntBASIC0.33□□□□□ -2.36
AP4S1Q9Y587 RNY1P10-201ENST00000363268 113 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 RNU6-1065P-201ENST00000384513 106 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 SRIP3-201ENST00000413200 219 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AL161935.2-201ENST00000414627 60 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 MOB1AP2-201ENST00000446060 614 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 SNORD124-201ENST00000459577 104 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AL163195.1-201ENST00000496941 348 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 RN7SKP88-201ENST00000516847 250 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 RNU6-586P-201ENST00000517265 104 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC109329.1-201ENST00000518744 317 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC022616.8-201ENST00000533569 253 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 GAS5-AS1-201ENST00000602767 694 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 7SK.8-201ENST00000612110 250 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 AC013476.2-201ENST00000614456 459 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 7SK.11-201ENST00000615477 250 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.32□□□□□ -2.36
AP4S1Q9Y587 7SK.13-201ENST00000622040 250 ntBASIC0.32□□□□□ -2.36
AP4S1Q9Y587 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.31□□□□□ -2.36
AP4S1Q9Y587 RNA5SP347-201ENST00000362445 119 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 RNU6-296P-201ENST00000384608 107 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AL121978.1-201ENST00000402778 359 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 HMGN2P9-201ENST00000476875 229 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.31□□□□□ -2.36
AP4S1Q9Y587 TRBVA-201ENST00000498804 316 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 RNA5SP121-201ENST00000516537 101 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 RNU6-678P-201ENST00000516832 109 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 MTCO2P15-201ENST00000532655 656 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC087897.1-201ENST00000550134 156 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.31□□□□□ -2.36
AP4S1Q9Y587 MIR4498-201ENST00000577599 66 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AP001429.1-201ENST00000602568 530 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 DUXAP11-201ENST00000603858 526 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC239868.4-201ENST00000608318 671 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC138627.2-201ENST00000624202 601 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC080188.3-201ENST00000624842 748 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
AP4S1Q9Y587 MIR96-201ENST00000362288 78 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 RNU2-32P-201ENST00000411193 191 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 CCDC58P2-201ENST00000417131 366 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 KATNBL1P3-201ENST00000443475 909 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AL078601.1-201ENST00000444542 271 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 SNRPFP3-201ENST00000457792 225 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 RNU6-229P-201ENST00000516614 102 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 RNA5SP102-201ENST00000516865 106 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.3□□□□□ -2.36
AP4S1Q9Y587 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AL357094.1-201ENST00000603845 844 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AC096772.1-201ENST00000609146 564 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 AL590396.2-201ENST00000636511 1041 ntBASIC0.3□□□□□ -2.36
AP4S1Q9Y587 SNORD114-24-201ENST00000365029 72 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 RNU6-878P-201ENST00000384578 110 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 RNU6-321P-201ENST00000410912 106 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 MTCYBP38-201ENST00000417160 1123 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 MTND2P4-201ENST00000445034 1004 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AL441985.1-201ENST00000457727 251 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AP003392.2-201ENST00000527269 208 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC022432.1-201ENST00000595739 310 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AC004908.3-201ENST00000610248 625 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 AL603758.1-201ENST00000618654 241 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 MIR5087-201ENST00000635826 76 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 MTND5P35-201ENST00000557537 1720 ntBASIC0.29□□□□□ -2.36
AP4S1Q9Y587 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
AP4S1Q9Y587 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 U3.8-201ENST00000363675 217 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 RNU1-93P-201ENST00000364704 169 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms