Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.08□□□□□ -2.4
NRXN3Q9Y4C0 AP002826.1-201ENST00000608835 315 ntBASIC0.08□□□□□ -2.4
NRXN3Q9Y4C0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.08□□□□□ -2.4
NRXN3Q9Y4C0 AC240442.1-201ENST00000616055 283 ntBASIC0.08□□□□□ -2.4
NRXN3Q9Y4C0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.08□□□□□ -2.4
NRXN3Q9Y4C0 RPS26P5-201ENST00000418544 335 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 RPL37P21-201ENST00000435890 276 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 SNORA70.16-201ENST00000516390 95 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 RNU6-197P-201ENST00000516680 100 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AP003034.1-201ENST00000534621 422 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AC007834.2-201ENST00000536310 343 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AC002400.1-201ENST00000569310 726 ntBASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.07□□□□□ -2.4
NRXN3Q9Y4C0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 RNA5SP258-201ENST00000362750 119 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 AC007742.1-201ENST00000425789 329 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 ELOCP26-201ENST00000436067 329 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 AC087897.1-201ENST00000550134 156 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 RPL30P11-203ENST00000598995 310 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 SNRPGP17-201ENST00000603780 214 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 AC080013.4-201ENST00000607624 649 ntBASIC0.06□□□□□ -2.4
NRXN3Q9Y4C0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 SNORD33-201ENST00000362761 85 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 MIR604-201ENST00000384880 94 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AC233702.2-202ENST00000562547 291 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 BX284668.6-201ENST00000606899 438 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 RNU6-30P-201ENST00000384561 107 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AL161788.1-201ENST00000441805 169 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 HMGN2P15-201ENST00000585707 270 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AC105224.1-201ENST00000587055 421 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 AC123767.1-202ENST00000620407 817 ntBASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.05□□□□□ -2.4
NRXN3Q9Y4C0 FARSBP1-201ENST00000435808 1778 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 RNU6-349P-201ENST00000362402 107 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 RNA5SP98-201ENST00000363158 137 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 Y_RNA.552-201ENST00000384665 112 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 MIR561-201ENST00000385216 97 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 MT-TC-201ENST00000387405 66 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 AC090142.3-201ENST00000519012 385 ntBASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.04□□□□□ -2.4
NRXN3Q9Y4C0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 RNU11-3P-201ENST00000391111 133 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 RNA5SP266-201ENST00000410273 108 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 RPS29P8-201ENST00000445109 171 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 MIR4723-201ENST00000585070 81 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC079791.1-201ENST00000605356 973 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC017083.3-201ENST00000609955 700 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 AC096586.2-201ENST00000610260 441 ntBASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.03□□□□□ -2.4
NRXN3Q9Y4C0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.03□□□□□ -2.41
NRXN3Q9Y4C0 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RNU6-1074P-201ENST00000383995 104 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RNU6-1083P-201ENST00000384022 107 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RNU6-748P-201ENST00000384648 107 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC092634.6-201ENST00000418558 192 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AL034418.1-201ENST00000448675 860 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 LARP7P4-201ENST00000481075 878 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 OR5AK1P-201ENST00000524837 922 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC012414.6-201ENST00000568241 401 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC008088.1-201ENST00000580993 280 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RNA5SP361-201ENST00000362686 118 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RNU6-270P-201ENST00000364131 105 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC244505.3-201ENST00000454598 187 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RPL31P3-201ENST00000458430 332 ntBASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
NRXN3Q9Y4C0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms