Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RHBDD3Q9Y3P4 AC092104.1-201ENST00000497346 1441 ntBASIC1.66□□□□□ -2.14
RHBDD3Q9Y3P4 MIR412-201ENST00000362142 91 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-433P-201ENST00000363216 104 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RNU5E-6P-201ENST00000365574 115 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-546P-201ENST00000383991 107 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-253P-201ENST00000384730 105 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 RN7SKP192-201ENST00000411291 327 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 SRIP3-201ENST00000413200 219 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 VN1R36P-201ENST00000414936 291 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 USP9YP18-201ENST00000425912 695 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 MTCO3P5-201ENST00000433620 714 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 PTENP1-201ENST00000447117 1215 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 NDUFB1P2-201ENST00000449477 176 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AC006026.2-201ENST00000457376 180 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AC008834.1-201ENST00000511612 175 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 SNORA44.1-201ENST00000517031 108 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AC105185.1-201ENST00000518705 535 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AC011979.2-201ENST00000527568 352 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AC092325.1-201ENST00000566449 554 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AL670379.2-201ENST00000604983 252 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AL670379.4-201ENST00000605279 254 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 AL158042.1-201ENST00000605338 460 ntBASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.65□□□□□ -2.15
RHBDD3Q9Y3P4 FARSBP1-201ENST00000435808 1778 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RNU2-32P-201ENST00000411193 191 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 SNORD56-201ENST00000413522 71 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 AL365338.1-201ENST00000422282 858 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 snoU109.3-201ENST00000459477 145 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 TRBV12-1-201ENST00000479785 344 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RPL21P99-201ENST00000480369 423 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-1003P-201ENST00000517099 105 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-201P-201ENST00000517100 61 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 HSPE1P18-201ENST00000517602 280 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 ARL2BPP2-201ENST00000550907 489 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 AL022154.1-201ENST00000604698 785 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 RMST_6.1-201ENST00000611980 203 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 AC093648.1-201ENST00000623546 606 ntBASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
RHBDD3Q9Y3P4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 SNORD14D-201ENST00000384390 87 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 MIR29B2-201ENST00000385055 81 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 RNU2-36P-201ENST00000410361 191 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 RNU2-48P-201ENST00000410694 191 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 Y_RNA.623-201ENST00000411128 95 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 UBE2V1P10-201ENST00000414685 269 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AL353777.1-201ENST00000425552 326 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AL627311.1-201ENST00000431514 115 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC018630.3-201ENST00000542637 96 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC090897.2-201ENST00000581715 130 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 MIR15A-201ENST00000607334 83 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC130324.3-201ENST00000614165 542 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AL049777.1-201ENST00000622740 518 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.63□□□□□ -2.15
RHBDD3Q9Y3P4 AC092881.1-201ENST00000638218 2733 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 Y_RNA.46-201ENST00000362695 102 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-946P-201ENST00000383878 107 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 CBX3P9-201ENST00000402326 552 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 RNA5SP390-201ENST00000410191 113 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC016831.2-201ENST00000417179 352 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL451074.3-201ENST00000437709 472 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms