Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL161798.1-201ENST00000604630 131 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.6□□□□□ -1.67
CDK11AQ9UQ88 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RNU6-82P-201ENST00000363970 107 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RNU6-512P-201ENST00000364438 103 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 SNORA9.2-201ENST00000365361 133 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RNU4-20P-201ENST00000365601 151 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 SNORA18.3-201ENST00000384122 132 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 MIR767-201ENST00000390228 109 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RNA5SP354-201ENST00000391247 136 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AL139397.2-201ENST00000404529 772 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 EEF1A1P40-201ENST00000412883 573 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 FTH1P25-201ENST00000447665 469 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AL109933.2-201ENST00000452651 260 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC114786.4-201ENST00000508771 728 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 SNORA64.4-201ENST00000516632 81 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RNA5SP471-201ENST00000516971 106 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC024153.1-201ENST00000603103 365 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 AC093913.1-201ENST00000614178 329 ntBASIC4.59□□□□□ -1.67
CDK11AQ9UQ88 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDK11AQ9UQ88 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 ZNF519P1-201ENST00000449011 1626 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.100-201ENST00000363141 102 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 RNU6-140P-201ENST00000384566 108 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.534-201ENST00000384599 112 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AL365496.1-201ENST00000426885 215 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 GPM6BP2-201ENST00000432046 144 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC087499.2-201ENST00000432861 149 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 GPM6BP1-201ENST00000446387 144 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC108938.1-201ENST00000451204 136 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC007547.1-201ENST00000462177 490 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 HMGN2P26-201ENST00000463169 339 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC104136.1-201ENST00000512969 394 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC068657.1-201ENST00000520807 306 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 CYCSP39-201ENST00000565821 309 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 MIR5692A1-201ENST00000580523 69 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AC007318.2-201ENST00000620999 243 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 AL512643.1-201ENST00000635735 524 ntBASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.58□□□□□ -1.68
CDK11AQ9UQ88 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 CBX3P1-201ENST00000325243 554 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.279-201ENST00000364763 95 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 RNU6-434P-201ENST00000384376 107 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 RNU6-1127P-201ENST00000384580 107 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AL139039.1-201ENST00000401900 692 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AL162578.1-201ENST00000406202 378 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AL592045.1-201ENST00000429867 352 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 PMCHL2-203ENST00000457791 237 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AP000852.1-201ENST00000472460 573 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 RN7SL20P-201ENST00000488827 297 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.654-201ENST00000497848 106 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 MTCO2P30-201ENST00000503662 364 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AC046134.1-201ENST00000514454 666 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 SNORA31.26-201ENST00000517250 137 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AL391261.3-201ENST00000557194 520 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 MIR3945-201ENST00000581853 98 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 UBE2V2P2-201ENST00000587677 504 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AC020895.1-201ENST00000595362 272 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AC136601.2-201ENST00000604356 474 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 AL357078.3-201ENST00000607528 618 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 Z99571.1-201ENST00000636677 394 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.57□□□□□ -1.68
CDK11AQ9UQ88 MTND4P12-201ENST00000498999 1377 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 RNA5SP383-201ENST00000362934 120 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 RNU6-393P-201ENST00000384475 107 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AL445529.1-201ENST00000398713 389 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 RPL23AP22-201ENST00000437556 453 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 RPS27P26-201ENST00000494583 239 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC008628.2-201ENST00000502605 298 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC104027.1-201ENST00000521887 300 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms