Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 MIR383-201ENST00000362257 73 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 CYP4F29P-201ENST00000420685 446 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 COX6B1P7-201ENST00000430845 235 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 snoU13.30-201ENST00000458951 104 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AC010469.1-201ENST00000463864 576 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 UQCRHP4-201ENST00000471686 272 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 MED28P6-201ENST00000558776 231 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AC022655.2-201ENST00000577280 318 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 MIR3653-201ENST00000625572 110 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL359693.1-201ENST00000614959 2407 ntBASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.33□□□□□ -1.72
AP4E1Q9UPM8 AL133412.1-201ENST00000380194 2992 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNA5SP388-201ENST00000362584 119 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 Y_RNA.170-201ENST00000363746 110 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNY4P28-201ENST00000365281 93 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNU6-47P-201ENST00000383866 107 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNU6-17P-201ENST00000384245 107 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNU6-318P-201ENST00000384283 103 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RNU6-18P-201ENST00000384527 107 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RPS12P23-201ENST00000419579 400 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 RPL27AP8-201ENST00000424277 446 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 EIF1P2-201ENST00000428233 350 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC005002.2-201ENST00000438228 269 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 ANP32BP2-201ENST00000454525 545 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC006517.1-201ENST00000480485 328 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC091167.1-201ENST00000492017 396 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC099522.1-202ENST00000514718 367 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 SNORD116-28-201ENST00000516123 91 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 MIR3138-201ENST00000585238 82 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AL713866.2-201ENST00000603579 219 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC011921.3-201ENST00000605540 361 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 MIR6748-201ENST00000610433 71 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC008785.1-201ENST00000624475 456 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 AC021753.1-201ENST00000635724 168 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AP4E1Q9UPM8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 RNU6-105P-201ENST00000363909 104 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 RNU6-72P-201ENST00000384285 79 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 BTF3L4P2-201ENST00000392798 346 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 FAR2P2-201ENST00000413041 594 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC244098.2-201ENST00000422068 99 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC098614.2-201ENST00000426040 255 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC007919.1-201ENST00000429380 217 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC069285.2-201ENST00000440210 275 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC009296.1-201ENST00000443146 155 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 RNA5SP246-201ENST00000458909 119 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 RN7SL481P-201ENST00000477764 299 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 MRPL42P6-201ENST00000486397 371 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 RPL7P47-201ENST00000497299 556 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 HMGB1P22-201ENST00000505315 124 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 ARF4P1-201ENST00000605447 541 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AL590240.4-201ENST00000616908 390 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AP4E1Q9UPM8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms