Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 PPP1R2P5-201ENST00000457256 603 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 RNU6-1003P-201ENST00000517099 105 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC079598.5-201ENST00000547460 117 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 MIR4419B-201ENST00000577260 68 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 MTCO2P2-201ENST00000591258 225 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC034229.4-201ENST00000607861 441 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AL355472.4-201ENST00000610233 626 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 AC091834.1-201ENST00000614543 472 ntBASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.14□□□□□ -2.07
CTNNA3Q9UI47 CDC27P3-201ENST00000635418 1910 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 MIR9-3-201ENST00000385084 90 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 RNU6-817P-201ENST00000391083 104 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC078974.1-201ENST00000411597 223 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AL451074.3-201ENST00000437709 472 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 SNORD11.1-201ENST00000459482 85 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AL163540.1-201ENST00000485382 386 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 HMGB1P35-201ENST00000503360 598 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 HMGB3P17-201ENST00000504195 649 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 SNORA31.23-201ENST00000517219 133 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 OR5AL2P-201ENST00000532185 920 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC087045.1-201ENST00000605856 382 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC090970.3-201ENST00000612566 866 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 MIR6134-201ENST00000617606 109 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AC008121.3-201ENST00000618726 433 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 AP002782.1-201ENST00000623107 614 ntBASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CTNNA3Q9UI47 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AL391994.1-201ENST00000254724 282 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 RNU1-72P-201ENST00000362976 153 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 RNU6-234P-201ENST00000365229 104 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 Y_RNA.508-201ENST00000384502 114 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 MIR499A-201ENST00000384903 122 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 RNU6-321P-201ENST00000410912 106 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 MTND6P13-201ENST00000443510 523 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 SNRPGP9-201ENST00000456025 225 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 RNU6-311P-201ENST00000516224 102 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 RNU6-201P-201ENST00000517100 61 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AP006587.4-201ENST00000526053 529 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AP000907.2-201ENST00000530827 353 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 PSMA3P-201ENST00000555485 635 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC233702.2-202ENST00000562547 291 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 MIR3683-201ENST00000580847 82 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 MIR4307-201ENST00000582802 84 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC245884.10-201ENST00000597355 337 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC013470.4-201ENST00000619978 986 ntBASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
CTNNA3Q9UI47 AC103710.2-202ENST00000641454 2853 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC138393.1-203ENST00000327086 343 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 RNU6-188P-201ENST00000364207 107 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 SNORA25B-201ENST00000365507 128 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 OR51A5P-201ENST00000415429 942 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 TIMM9P1-201ENST00000436122 256 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC092473.1-201ENST00000441098 221 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 USP9YP15-201ENST00000442391 422 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 BRK1P2-201ENST00000442875 223 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC023194.1-201ENST00000493084 308 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 RPL23AP63-201ENST00000498752 471 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC104685.1-201ENST00000502445 371 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC034244.1-201ENST00000507687 207 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 SNORA48.11-201ENST00000517015 89 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 MIR3122-201ENST00000577243 73 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 MIR3618-201ENST00000580330 88 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 MIR4999-201ENST00000585029 91 ntBASIC2.11□□□□□ -2.07
CTNNA3Q9UI47 AC174048.1-201ENST00000603389 144 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms