Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
USP25Q9UHP3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP25Q9UHP3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP25Q9UHP3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP25Q9UHP3 RNU6-884P-201ENST00000363889 107 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 RNU6-715P-201ENST00000365204 103 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 SNORA5A-201ENST00000384111 134 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 CISD1P1-201ENST00000393907 327 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 SYF2P2-201ENST00000417620 583 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 SKA2P1-201ENST00000425592 390 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AL445584.1-201ENST00000431451 330 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC009969.1-201ENST00000438726 172 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC079140.5-201ENST00000507882 310 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 SNORA14.1-201ENST00000516113 141 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 RNU6-273P-201ENST00000516937 96 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 APOOP3-201ENST00000536787 586 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.8□□□□□ -1.8
USP25Q9UHP3 ELOCP31-201ENST00000540463 467 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC007151.1-201ENST00000572774 483 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 MIR3941-201ENST00000582572 103 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP25Q9UHP3 SNRPGP17-201ENST00000603780 214 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AL360085.1-201ENST00000604713 532 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AL162730.1-201ENST00000605734 292 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AL627309.6-201ENST00000606857 840 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 AL138726.1-201ENST00000614873 333 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 CR392039.5-201ENST00000623201 510 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 ZNF285B-201ENST00000561698 1767 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP25Q9UHP3 AC010680.1-201ENST00000590024 3590 ntBASIC3.8□□□□□ -1.8
USP25Q9UHP3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP25Q9UHP3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 U3.6-201ENST00000363622 211 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 SNORA70.4-201ENST00000365509 134 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 SNORD116-11-201ENST00000383882 92 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 Y_RNA.395-201ENST00000383945 109 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 RNU6-474P-201ENST00000384243 107 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 MIR449B-201ENST00000384995 97 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP25Q9UHP3 ATG3P1-201ENST00000419507 911 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 HMGN2P30-201ENST00000423237 256 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP25Q9UHP3 AL714022.1-201ENST00000439897 151 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC104619.4-201ENST00000510773 249 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 CYP2C61P-201ENST00000604072 290 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 AL080274.1-201ENST00000605565 220 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC004852.3-201ENST00000614131 326 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC098657.3-201ENST00000620434 263 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP25Q9UHP3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
USP25Q9UHP3 MTND5P7-201ENST00000413558 1798 ntBASIC3.79□□□□□ -1.8
USP25Q9UHP3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.78□□□□□ -1.8
USP25Q9UHP3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP25Q9UHP3 MIR559-201ENST00000385188 96 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 SNORD17-201ENST00000390930 237 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 RPL5P18-201ENST00000406671 891 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 RNU6-370P-201ENST00000411008 104 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 RNA5SP111-201ENST00000411386 101 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP25Q9UHP3 MTND2P23-201ENST00000422990 651 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AL160275.3-201ENST00000423876 471 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 RPL32P28-201ENST00000443577 397 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.78□□□□□ -1.8
USP25Q9UHP3 NIPA2P5-201ENST00000452282 464 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.78□□□□□ -1.8
USP25Q9UHP3 RNU7-23P-201ENST00000459465 62 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AC130509.1-201ENST00000464158 433 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AC027575.1-201ENST00000481064 460 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 SUMO2P6-201ENST00000505273 288 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AC008526.1-201ENST00000509149 338 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 AC104136.1-201ENST00000512969 394 ntBASIC3.78□□□□□ -1.8
USP25Q9UHP3 RN7SKP24-201ENST00000515888 284 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms