Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 SNORA32.2-201ENST00000384049 122 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 MIR578-201ENST00000384828 96 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 MIR196B-201ENST00000384852 84 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 RNU6-1025P-201ENST00000410629 104 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 RNU2-68P-201ENST00000410878 191 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 RNU6-373P-201ENST00000411247 98 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.2□□□□□ -1.9
FBXO40Q9UH90 ATG3P1-201ENST00000419507 911 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 ERLEC1P1-201ENST00000433806 578 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC074344.1-201ENST00000512823 224 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC112206.3-201ENST00000514578 389 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 HPRT1P3-201ENST00000539521 576 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AL157871.3-201ENST00000557231 293 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.2□□□□□ -1.9
FBXO40Q9UH90 MIR548AC-201ENST00000585049 88 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 RNU6-89P-201ENST00000606519 100 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC090617.10-201ENST00000624308 134 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AP003400.5-201ENST00000624827 617 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.2□□□□□ -1.9
FBXO40Q9UH90 AC004944.1-201ENST00000517807 3059 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 MTND5P7-201ENST00000413558 1798 ntBASIC3.2□□□□□ -1.9
FBXO40Q9UH90 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 RNU6-393P-201ENST00000384475 107 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 RNU6-1179P-201ENST00000384667 107 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 SNORA1.3-201ENST00000384676 136 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 RNA5SP219-201ENST00000390940 113 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL592114.1-201ENST00000403842 483 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL162578.1-201ENST00000406202 378 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 RNU4-26P-201ENST00000410270 107 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 SNRPEP9-201ENST00000436794 238 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL590639.1-201ENST00000456484 337 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 BTF3P12-201ENST00000519620 469 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 CENPUP1-201ENST00000526649 1202 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC078814.3-201ENST00000553036 491 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL121579.1-201ENST00000555129 305 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC005730.3-201ENST00000583067 366 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 MIR4424-201ENST00000585257 86 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC092747.3-201ENST00000603769 301 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC092807.2-201ENST00000609367 243 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC006504.8-201ENST00000621046 635 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
FBXO40Q9UH90 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
FBXO40Q9UH90 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 Y_RNA.33-201ENST00000362591 102 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RNU6-301P-201ENST00000384277 107 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RNU6-45P-201ENST00000384471 107 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 MIR514A2-201ENST00000385131 88 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 MIR514A3-201ENST00000385132 88 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RNU2-52P-201ENST00000410680 190 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL592148.1-201ENST00000413568 445 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC092047.1-201ENST00000424997 240 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL513043.1-201ENST00000439124 535 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RN7SL429P-201ENST00000479090 223 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RN7SL489P-201ENST00000486185 223 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC083904.1-201ENST00000487828 231 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RN7SL327P-201ENST00000488659 223 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC114786.4-201ENST00000508771 728 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC098799.2-201ENST00000509466 868 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RNU6-1282P-201ENST00000516735 96 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AP003122.3-201ENST00000526316 255 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC084851.1-201ENST00000529105 249 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC023050.3-201ENST00000541142 333 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC012119.1-201ENST00000603184 222 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 U2.17-201ENST00000611454 95 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AL138880.2-201ENST00000616214 239 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 RN7SL853P-201ENST00000617250 223 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC073308.1-201ENST00000623696 305 ntBASIC3.18□□□□□ -1.9
FBXO40Q9UH90 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
FBXO40Q9UH90 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FBXO40Q9UH90 RNU1-35P-201ENST00000362782 153 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms