Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 HIGD1AP2-201ENST00000446367 280 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 CHEK2P4-201ENST00000450340 246 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC013470.1-201ENST00000453438 462 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC112492.4-201ENST00000456549 352 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 UBE2CP3-201ENST00000502715 450 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC114801.2-201ENST00000503825 781 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC110794.1-201ENST00000505816 425 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 RNU6-703P-201ENST00000516946 107 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC023632.4-201ENST00000517783 191 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AP002404.1-201ENST00000532005 451 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 CYCSP39-201ENST00000565821 309 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC034105.4-201ENST00000568304 277 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 MIR5685-201ENST00000579080 79 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC006006.1-201ENST00000603082 144 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AC124312.5-201ENST00000604451 268 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 MIR4272-201ENST00000635924 64 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 U4.7-201ENST00000638126 106 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.65□□□□□ -1.82
KCMF1Q9P0J7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
KCMF1Q9P0J7 ZNF299P-201ENST00000406845 1804 ntBASIC3.65□□□□□ -1.82
KCMF1Q9P0J7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KCMF1Q9P0J7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 U3.6-201ENST00000363622 211 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RNU6-336P-201ENST00000364891 107 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RNU6-505P-201ENST00000384427 107 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RN7SKP27-201ENST00000410684 333 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 OR2AQ1P-201ENST00000451972 200 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RNU7-169P-201ENST00000459456 61 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 RNU7-4P-201ENST00000516961 62 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC090877.1-201ENST00000561418 344 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC004584.2-201ENST00000570407 410 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 MIR4644-201ENST00000579929 84 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 7SK.7-201ENST00000603504 247 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AL355598.1-201ENST00000604169 202 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC110741.2-201ENST00000605278 268 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC005046.1-201ENST00000608515 625 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 SCARNA4-202ENST00000625402 129 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AC066616.2-201ENST00000559334 1481 ntBASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
KCMF1Q9P0J7 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 RNA5SP97-201ENST00000365006 84 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SNORD6-201ENST00000365444 73 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SNORD14.1-201ENST00000365609 90 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 Z98749.2-208ENST00000381646 500 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.401-201ENST00000383965 117 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.574-201ENST00000384766 95 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 MIR554-201ENST00000384874 96 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 MIR625-201ENST00000385047 85 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 CYCSP19-201ENST00000411715 316 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 EIF4EP2-201ENST00000422816 654 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 HMGN2P30-201ENST00000423237 256 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC092423.1-201ENST00000430165 186 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 RPL21P104-201ENST00000464143 478 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 RNU1-45P-201ENST00000517191 141 ntBASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
KCMF1Q9P0J7 LINC00933-203ENST00000559812 219 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms