Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 SSXP1-201ENST00000453640 473 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 MTND1P12-201ENST00000455231 147 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC117522.2-201ENST00000510049 657 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 RN7SKP265-201ENST00000516448 223 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC107953.1-201ENST00000522216 297 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL354943.1-201ENST00000572103 781 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 MIR4524B-201ENST00000581569 115 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 MIR3118-1-201ENST00000581787 76 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AP000811.1-201ENST00000603803 651 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC087045.1-201ENST00000605856 382 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 TUSC7.1-201ENST00000610969 165 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AC091953.2-201ENST00000623979 160 ntBASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
KLHL28Q9NXS3 SNORD114-1-201ENST00000362705 72 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 SNORA75B-201ENST00000384053 137 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 XKRYP1-201ENST00000423438 492 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 XKRYP2-201ENST00000432915 492 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 RPL22P17-201ENST00000438729 315 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC118469.1-201ENST00000442943 488 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AL606662.1-201ENST00000445763 553 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC007182.2-201ENST00000489251 402 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC136619.2-201ENST00000563361 631 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 MIR4760-201ENST00000585040 80 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AL031274.2-201ENST00000599419 203 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC096772.1-201ENST00000609146 564 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AP000240.1-201ENST00000609910 452 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC005296.1-201ENST00000616145 209 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AC017037.3-201ENST00000625016 472 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 AL445523.1-201ENST00000451184 1362 ntBASIC1.94□□□□□ -2.1
KLHL28Q9NXS3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 MIR561-201ENST00000385216 97 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC016831.2-201ENST00000417179 352 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC009518.2-201ENST00000418056 731 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 TOMM20P4-201ENST00000427861 435 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AL354941.1-201ENST00000438600 464 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AL353689.1-201ENST00000438895 199 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 SNORA4.4-201ENST00000515921 135 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AP003122.4-201ENST00000530980 758 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 MTND1P24-201ENST00000552175 861 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 ZNF519P3-201ENST00000557158 1032 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC233702.2-202ENST00000562547 291 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC234772.3-201ENST00000602277 528 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AL022154.1-201ENST00000604698 785 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC092656.1-203ENST00000624134 423 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KLHL28Q9NXS3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 HSPE1P11-201ENST00000339579 310 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 U3.13-201ENST00000364804 214 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 SNORA25B-201ENST00000365507 128 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 SNORD115.1-201ENST00000391109 76 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 HMGN2P39-201ENST00000398005 273 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 RPS15AP12-201ENST00000419498 388 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms