Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC008267.5-201ENST00000424928 265 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 HMGB1P30-201ENST00000492455 606 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AP003122.4-201ENST00000530980 758 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC007375.1-201ENST00000554513 578 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC093249.1-201ENST00000567049 203 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 MIR3118-1-201ENST00000581787 76 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 ELOCP5-201ENST00000604924 333 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC018714.1-201ENST00000605028 208 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 AC021646.1-201ENST00000605469 484 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 YWHAEP7-203ENST00000622054 312 ntBASIC1.69□□□□□ -2.14
CLN6Q9NWW5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CLN6Q9NWW5 ZNF355P-201ENST00000427301 3216 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 MIR412-201ENST00000362142 91 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RNU6-1010P-201ENST00000362757 107 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RNU6-533P-201ENST00000384144 107 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 SNORA67.3-201ENST00000384366 140 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 MIR186-201ENST00000384988 86 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RSL24D1P4-201ENST00000400938 484 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RNU6-1140P-201ENST00000410517 106 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RNA5SP450-201ENST00000411206 102 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 UBE2V1P10-201ENST00000414685 269 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 HSFY7P-201ENST00000432672 318 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 HSFY8P-201ENST00000437934 318 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 MTND6P13-201ENST00000443510 523 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL606517.1-201ENST00000446914 387 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 HSFY5P-201ENST00000453726 309 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 RNU2-53P-201ENST00000516257 147 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AP004607.1-201ENST00000524456 203 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 NDUFA5P6-201ENST00000542110 379 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL512310.1-201ENST00000548639 172 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL354943.1-201ENST00000572103 781 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 MTCYBP33-201ENST00000575007 1130 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL022154.1-201ENST00000604698 785 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL158032.1-201ENST00000605401 106 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AC126118.1-201ENST00000607744 628 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 AL359547.2-201ENST00000615810 418 ntBASIC1.68□□□□□ -2.14
CLN6Q9NWW5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC073343.1-201ENST00000328239 651 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 XGY1-201ENST00000381172 446 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RNU6-843P-201ENST00000384454 104 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 MIR518A2-201ENST00000384966 87 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RNU2-2P-201ENST00000410396 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AL627311.1-201ENST00000431514 115 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC096638.1-201ENST00000444678 216 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AL137159.1-201ENST00000452808 512 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 snoU109.2-201ENST00000459316 135 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AP001486.1-201ENST00000463339 476 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RPL9P6-201ENST00000492764 598 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RNA5SP337-201ENST00000517007 109 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RNU6-667P-201ENST00000517186 102 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 MTND2P7-201ENST00000521337 640 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 SNRPGP17-201ENST00000603780 214 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AP002360.4-201ENST00000606980 481 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC098614.4-201ENST00000607601 462 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.15-201ENST00000611544 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.16-201ENST00000613119 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.12-201ENST00000613778 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.20-201ENST00000613956 192 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.9-201ENST00000615427 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 uc_338.15-201ENST00000615470 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.11-201ENST00000616345 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.2-201ENST00000616535 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.3-201ENST00000617785 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.19-201ENST00000618602 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 RNU2-1-201ENST00000618664 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.6-201ENST00000619225 191 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms