Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FTH1P2-201ENST00000466086 412 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC026784.1-201ENST00000507986 352 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 RNU6-581P-201ENST00000516214 105 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 RNU6-307P-201ENST00000516743 106 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 Y_RNA.711-201ENST00000516993 102 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 RNU6-264P-201ENST00000517134 104 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MTCO3P13-201ENST00000577757 781 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MIR4644-201ENST00000579929 84 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MIR4697-201ENST00000582977 78 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 AC018889.1-201ENST00000605372 397 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 MTND5P7-201ENST00000413558 1798 ntBASIC3.37□□□□□ -1.87
RLIMQ9NVW2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.37□□□□□ -1.87
RLIMQ9NVW2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RNU6-336P-201ENST00000364891 107 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 Y_RNA.395-201ENST00000383945 109 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RPL32P34-201ENST00000486380 400 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RNU6-470P-201ENST00000515954 104 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RNU6-976P-201ENST00000516086 111 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RNU6-612P-201ENST00000516909 102 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC007991.1-201ENST00000522680 631 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC005899.2-201ENST00000584353 90 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC244505.7-201ENST00000599675 272 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 SRGNP1-201ENST00000603392 451 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC005034.5-201ENST00000604219 466 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AL360085.1-201ENST00000604713 532 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC110741.2-201ENST00000605278 268 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 PLCE1P1-201ENST00000622094 305 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC006111.3-201ENST00000622137 383 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 U4.7-201ENST00000638126 106 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RLIMQ9NVW2 AC008725.1-201ENST00000605123 2263 ntBASIC3.36□□□□□ -1.87
RLIMQ9NVW2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RNU6-1115P-201ENST00000362490 106 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SNORD116-20-201ENST00000384529 92 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RN7SKP156-201ENST00000410308 342 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 PMCHL1-202ENST00000423102 261 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC010099.1-201ENST00000455434 375 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC006026.2-201ENST00000457376 180 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AL133162.1-201ENST00000463228 453 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RPL23AP62-201ENST00000463396 453 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SNORA43.2-201ENST00000516652 128 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 RN7SKP295-201ENST00000517264 153 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AP005902.1-201ENST00000521358 186 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AP006245.1-201ENST00000522549 120 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 NACAP3-201ENST00000552100 481 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC005476.1-201ENST00000554427 397 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 MIR5685-201ENST00000579080 79 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 MIR5187-201ENST00000583479 76 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC006504.6-201ENST00000590142 199 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 HMGB1P24-202ENST00000615653 685 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 AC068724.3-201ENST00000625906 87 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms