Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RBMY2UP-201ENST00000453474 324 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 RN7SKP57-201ENST00000517248 293 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL390123.1-201ENST00000603216 237 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL670379.6-201ENST00000603753 252 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL670379.1-201ENST00000604752 252 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL670379.5-201ENST00000605253 252 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL670379.8-201ENST00000605353 252 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL670379.7-201ENST00000605823 252 ntBASIC4.79□□□□□ -1.64
ATG3Q9NT62 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG3Q9NT62 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG3Q9NT62 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG3Q9NT62 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG3Q9NT62 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATG3Q9NT62 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG3Q9NT62 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG3Q9NT62 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATG3Q9NT62 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATG3Q9NT62 snoU2_19.2-201ENST00000363024 80 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 Y_RNA.183-201ENST00000363882 113 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 Y_RNA.277-201ENST00000364754 102 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 RNU6-837P-201ENST00000391056 108 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 SNORA11.2-201ENST00000408318 127 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC244098.2-201ENST00000422068 99 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 RNU7-138P-201ENST00000459479 64 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC010631.1-201ENST00000474150 156 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 RNU7-4P-201ENST00000516961 62 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC004024.1-201ENST00000549244 247 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC012669.1-201ENST00000603209 283 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 AC006023.2-201ENST00000609916 167 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 SNHG22-203ENST00000617833 660 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 HSPA8P1-201ENST00000425843 1833 ntBASIC4.78□□□□□ -1.64
ATG3Q9NT62 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.78□□□□□ -1.64
ATG3Q9NT62 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 AL391987.6-201ENST00000305671 199 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 MIR335-201ENST00000362173 94 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 Y_RNA.54-201ENST00000362766 105 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 RNA5SP50-201ENST00000363731 107 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 RNU1-33P-201ENST00000364249 162 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 RNU6-637P-201ENST00000384050 107 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 RNU6-45P-201ENST00000384471 107 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 Y_RNA.526-201ENST00000384572 110 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 EIF4EP2-201ENST00000422816 654 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 MTCO3P29-201ENST00000432119 779 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 TMSB4XP3-201ENST00000445144 114 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ATG3Q9NT62 AP000926.1-201ENST00000479573 241 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC107393.1-201ENST00000512403 346 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 GMPSP1-201ENST00000514075 579 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 RNU4-71P-201ENST00000516258 113 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 Y_RNA.683-201ENST00000516508 93 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 Y_RNA.687-201ENST00000516558 91 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 SNORA70.18-201ENST00000516696 98 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC034114.1-201ENST00000520293 285 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC090877.1-201ENST00000561418 344 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 MIR548AI-201ENST00000579940 88 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC006077.1-201ENST00000604746 343 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 AC110801.1-201ENST00000623590 212 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 UBE3AP2-201ENST00000429033 2259 ntBASIC4.77□□□□□ -1.65
ATG3Q9NT62 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ATG3Q9NT62 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ATG3Q9NT62 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG3Q9NT62 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 AC007685.1-201ENST00000329806 452 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 Y_RNA.200-201ENST00000364018 102 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 Y_RNA.352-201ENST00000365439 102 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 EIF1P2-201ENST00000428233 350 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 Y_RNA.644-201ENST00000459006 113 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 Y_RNA.674-201ENST00000516362 113 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 ERHP1-201ENST00000523006 310 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 DEFB108E-201ENST00000524692 240 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 AP006587.4-201ENST00000526053 529 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG3Q9NT62 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.76□□□□□ -1.65
ATG3Q9NT62 MIR4643-201ENST00000577473 78 ntBASIC4.76□□□□□ -1.65
ATG3Q9NT62 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms