Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 AC104850.1-201ENST00000435940 476 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC004383.1-201ENST00000438135 289 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 RPS24P1-201ENST00000438550 371 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 FAM92A1P2-202ENST00000504766 877 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC005771.1-201ENST00000585581 349 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AL158032.1-201ENST00000605401 106 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AL603839.4-201ENST00000624658 1005 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 AC064859.1-201ENST00000624741 174 ntBASIC1.93□□□□□ -2.1
CTPS2Q9NRF8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 Y_RNA.22-201ENST00000362492 102 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 Y_RNA.33-201ENST00000362591 102 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 U8.3-201ENST00000363321 132 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 SNORA20.2-201ENST00000383922 131 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 MIR558-201ENST00000384920 94 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 SNORA26.8-201ENST00000391306 124 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RPS3AP36-201ENST00000398190 775 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 CIR1P3-201ENST00000405137 479 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 SNORA3.2-201ENST00000408221 125 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RPS3AP3-201ENST00000411933 242 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AL135786.1-201ENST00000415892 214 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 USP9YP8-201ENST00000441913 500 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AL078601.1-201ENST00000444542 271 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC108078.2-201ENST00000510750 236 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC008549.1-201ENST00000512900 643 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RNU7-193P-201ENST00000516723 65 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RNU1-40P-201ENST00000516816 164 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 RNU1-97P-201ENST00000516872 164 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 OR5AQ1P-201ENST00000527596 927 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 MIR1273C-201ENST00000578669 77 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 NIFKP6-201ENST00000598115 845 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC008250.2-201ENST00000615261 205 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC010378.1-201ENST00000619270 362 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 AC091931.1-201ENST00000623488 728 ntBASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
CTPS2Q9NRF8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 OR56A5-201ENST00000340110 738 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNY4P34-201ENST00000364779 95 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNU6-1280P-201ENST00000365211 107 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNU6-166P-201ENST00000384371 107 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 SNORA24.1-201ENST00000384401 135 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 MIR518D-201ENST00000385014 87 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNU6-195P-201ENST00000411352 109 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC127391.1-201ENST00000411737 98 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 HMGN1P14-201ENST00000412459 517 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 EIF4EP4-201ENST00000424916 578 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AL022238.1-201ENST00000442557 355 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 MTND3P7-201ENST00000474435 343 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC068781.1-201ENST00000488231 618 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC023194.1-201ENST00000493084 308 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC116655.1-201ENST00000508324 901 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC010486.1-201ENST00000511793 424 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 RNU6-123P-201ENST00000516163 102 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 SCARNA24.1-201ENST00000516465 137 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 ACA59.2-201ENST00000517061 156 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 LINC00933-203ENST00000559812 219 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC126118.1-201ENST00000607744 628 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AL133173.2-201ENST00000614270 90 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC024940.5-201ENST00000622889 474 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.91□□□□□ -2.1
CTPS2Q9NRF8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms