Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC010486.1-201ENST00000511793 424 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 RPL7P20-201ENST00000520308 745 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC243972.3-201ENST00000539655 198 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 MIR3124-201ENST00000582636 67 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC136601.2-201ENST00000604356 474 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 Z99571.1-201ENST00000636677 394 ntBASIC3.11□□□□□ -1.91
DDX4Q9NQI0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX4Q9NQI0 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 NACAP2-201ENST00000318548 624 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 SNORD62.1-201ENST00000362541 86 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RNU6-116P-201ENST00000384042 109 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AL592114.1-201ENST00000403842 483 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RPLP0P7-201ENST00000416050 667 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RNU7-180P-201ENST00000459240 63 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RPS29P25-201ENST00000481709 171 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 LRRC34P2-201ENST00000514850 553 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RNU1-41P-201ENST00000516161 162 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 RNU1-48P-201ENST00000516400 162 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AP003122.3-201ENST00000526316 255 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AC084851.1-201ENST00000529105 249 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AMZ2P1-203ENST00000565833 850 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 MIR3609-201ENST00000582661 80 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AL161629.2-201ENST00000615347 275 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
DDX4Q9NQI0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX4Q9NQI0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 RNA5SP289-201ENST00000362332 137 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 RNU6-1283P-201ENST00000365314 105 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 RNU6-395P-201ENST00000365662 106 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 RNU6-140P-201ENST00000384566 108 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 RNU6-1068P-201ENST00000410958 103 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 OR9R1P-201ENST00000412200 877 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 SNRPEP9-201ENST00000436794 238 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 Z96811.1-201ENST00000445880 108 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 WASF1P1-201ENST00000447560 1131 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 NFU1P2-201ENST00000448700 469 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC008413.1-201ENST00000511864 177 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MTND4P7-201ENST00000523876 130 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 SUB1P1-201ENST00000524415 382 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL157871.3-201ENST00000557231 293 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AL138976.2-201ENST00000563989 694 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MIR5692A1-201ENST00000580523 69 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC078899.3-201ENST00000599065 212 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 HSPE1P7-201ENST00000604681 321 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 uc_338.34-201ENST00000617467 174 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AC002064.3-201ENST00000623448 346 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 MIR3662-201ENST00000637030 95 ntBASIC3.09□□□□□ -1.91
DDX4Q9NQI0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX4Q9NQI0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 OR4G1P-203ENST00000641984 1631 ntBASIC3.08□□□□□ -1.92
DDX4Q9NQI0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX4Q9NQI0 SNORD56.5-201ENST00000364281 72 ntBASIC3.08□□□□□ -1.92
DDX4Q9NQI0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.08□□□□□ -1.92
DDX4Q9NQI0 AL139095.1-201ENST00000404326 391 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms