Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL160413.1-201ENST00000622780 310 ntBASIC3.82□□□□□ -1.8
VTA1Q9NP79 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTA1Q9NP79 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
VTA1Q9NP79 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VTA1Q9NP79 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
VTA1Q9NP79 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.81□□□□□ -1.8
VTA1Q9NP79 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VTA1Q9NP79 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC068647.1-201ENST00000489539 2265 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 SNORD3E-201ENST00000362899 217 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 RNA5SP374-201ENST00000362939 125 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VTA1Q9NP79 SNORA48.5-201ENST00000391143 135 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AL357075.1-201ENST00000404107 726 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 RNU6-954P-201ENST00000411355 107 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 MTND1P14-201ENST00000427400 950 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 SNORD19B-201ENST00000459623 84 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 RN7SL93P-201ENST00000463035 293 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VTA1Q9NP79 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.81□□□□□ -1.8
VTA1Q9NP79 RNU6-1183P-201ENST00000517054 60 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 RNU1-54P-201ENST00000517181 120 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC044792.1-201ENST00000593294 196 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC073657.2-201ENST00000605661 303 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AL050343.2-201ENST00000607338 280 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC068831.7-201ENST00000616954 363 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC073308.1-201ENST00000623696 305 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC006026.1-201ENST00000444025 1803 ntBASIC3.81□□□□□ -1.8
VTA1Q9NP79 AC058791.1-201ENST00000608412 3198 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 SNORD62.1-201ENST00000362541 86 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 RNU1-18P-201ENST00000363062 164 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 RNA5SP197-201ENST00000363357 119 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 RNU6-884P-201ENST00000363889 107 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 U3.37-201ENST00000408528 213 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 RNU4-47P-201ENST00000410876 114 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 MRPS31P2-201ENST00000451581 518 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 RNU6-1037P-201ENST00000459571 107 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC104472.2-201ENST00000469035 601 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC116337.1-201ENST00000509680 687 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC092436.3-201ENST00000511788 257 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AP005597.4-201ENST00000526762 229 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AL442663.2-201ENST00000554385 511 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 CYP2C61P-201ENST00000604072 290 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AL670379.10-201ENST00000604330 253 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 HSPE1P7-201ENST00000604681 321 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AL670379.9-201ENST00000605428 253 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC008962.1-201ENST00000605729 304 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC133104.2-201ENST00000615272 193 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC098657.3-201ENST00000620434 263 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.8□□□□□ -1.8
VTA1Q9NP79 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 AC006111.3-201ENST00000622137 383 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
VTA1Q9NP79 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VTA1Q9NP79 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC010680.1-201ENST00000590024 3590 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 Y_RNA.111-201ENST00000363248 100 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 RNU6-95P-201ENST00000384697 107 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 RNA5SP31-201ENST00000411144 127 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC099548.1-201ENST00000421443 426 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 RPL7P37-201ENST00000425095 738 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 SKA2P1-201ENST00000425592 390 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 RPS15AP10-201ENST00000432472 382 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AL357552.1-201ENST00000445254 415 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 RPL26P9-201ENST00000457466 433 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 RPL23AP14-201ENST00000468281 468 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 RNU6-1016P-201ENST00000516689 94 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 CYCSP39-201ENST00000565821 309 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.79□□□□□ -1.8
VTA1Q9NP79 AC008121.1-201ENST00000603244 268 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 AL133255.1-201ENST00000606374 441 ntBASIC3.79□□□□□ -1.8
VTA1Q9NP79 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms