Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL021997.1-201ENST00000605757 193 ntBASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 AC069234.5-201ENST00000611056 416 ntBASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 UCA1.1-201ENST00000620952 75 ntBASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 AC022418.1-201ENST00000624118 445 ntBASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.94□□□□□ -1.94
POLR1BQ9H9Y6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 Y_RNA.402-201ENST00000383972 102 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 Y_RNA.480-201ENST00000384364 102 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL512633.1-201ENST00000399931 655 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL592114.1-201ENST00000403842 483 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL606923.1-201ENST00000406616 190 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 RAP1BP3-201ENST00000407180 549 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 RNU6-648P-201ENST00000410190 107 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 RNU2-49P-201ENST00000410666 184 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL592148.1-201ENST00000413568 445 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL161651.1-201ENST00000440882 223 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC011005.2-201ENST00000487324 359 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC083906.5-201ENST00000503722 328 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 RNA5SP76-201ENST00000516277 87 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC109635.3-201ENST00000529536 185 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC092325.1-201ENST00000566449 554 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 MIR3945-201ENST00000581853 98 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 MIR4424-201ENST00000585257 86 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC008739.2-201ENST00000597006 317 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC073539.2-201ENST00000597113 165 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 uc_338.34-201ENST00000617467 174 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC068137.3-201ENST00000639191 341 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC073869.6-201ENST00000640656 341 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AL136360.1-201ENST00000503377 1900 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 AC093536.2-201ENST00000565257 1406 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.93□□□□□ -1.94
POLR1BQ9H9Y6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 RNY4P14-201ENST00000363656 96 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 Y_RNA.381-201ENST00000365666 102 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 SNORD21-201ENST00000383953 95 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 SNORD70.1-201ENST00000391007 85 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL445529.1-201ENST00000398713 389 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 FCF1P9-201ENST00000412546 282 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 MTCO1P21-201ENST00000416634 589 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 USP9YP18-201ENST00000425912 695 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 TOMM20P4-201ENST00000427861 435 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC105272.1-201ENST00000438604 198 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 RPS12P18-201ENST00000442381 270 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 OSTCP8-201ENST00000445117 448 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 RPS29P26-201ENST00000477483 171 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 RNU2-69P-201ENST00000516061 100 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 SNORD60.2-201ENST00000516883 86 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 MTND1P5-201ENST00000517906 940 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AL121821.2-201ENST00000556081 394 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC104984.5-201ENST00000586878 94 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 SCARNA4-202ENST00000625402 129 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1BQ9H9Y6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 SNORD3E-201ENST00000362899 217 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 RNU6-82P-201ENST00000363970 107 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 RNU6-483P-201ENST00000384088 108 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 Y_RNA.573-201ENST00000384763 105 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 MIR10A-201ENST00000385043 110 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 SNORD67-201ENST00000390833 111 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 SNORD37.1-201ENST00000390968 65 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 U3.37-201ENST00000408528 213 ntBASIC2.91□□□□□ -1.94
POLR1BQ9H9Y6 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms