Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 RNU6-843P-201ENST00000384454 104 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 UBE2V1P10-201ENST00000414685 269 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL137159.1-201ENST00000452808 512 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 MTAPP1-201ENST00000489154 819 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 MRPS17P9-201ENST00000511924 393 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC109329.1-201ENST00000518744 317 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AP003122.4-201ENST00000530980 758 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 ZNF519P3-201ENST00000557158 1032 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC093249.1-201ENST00000567049 203 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC243960.4-201ENST00000600532 288 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL109918.3-201ENST00000603072 338 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AP000811.1-201ENST00000603803 651 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL022154.1-201ENST00000604698 785 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL158032.1-201ENST00000605401 106 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC021646.1-201ENST00000605469 484 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AC126118.1-201ENST00000607744 628 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 uc_338.15-201ENST00000615470 191 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AP002782.1-201ENST00000623107 614 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 ZNF355P-201ENST00000427301 3216 ntBASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRRC40Q9H9A6 AL391994.1-201ENST00000254724 282 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 MIR412-201ENST00000362142 91 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 RSL24D1P4-201ENST00000400938 484 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 XKRYP1-201ENST00000423438 492 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 XKRYP2-201ENST00000432915 492 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AL354941.1-201ENST00000438600 464 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AL606517.1-201ENST00000446914 387 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 HMGB1P30-201ENST00000492455 606 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AC112204.1-201ENST00000502591 103 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 RNU6-311P-201ENST00000516224 102 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 RNU6-667P-201ENST00000517186 102 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 IMMP1LP2-201ENST00000552954 492 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 MTCYBP33-201ENST00000575007 1130 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 SNRPGP17-201ENST00000603780 214 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AC098614.4-201ENST00000607601 462 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AL359547.2-201ENST00000615810 418 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 AC009487.4-201ENST00000624969 3585 ntBASIC1.98□□□□□ -2.09
LRRC40Q9H9A6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC073343.1-201ENST00000328239 651 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 RPL23AP39-201ENST00000415533 405 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AL627311.1-201ENST00000431514 115 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 RPL23AP6-201ENST00000446637 472 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC034244.1-201ENST00000507687 207 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 HSPE1P18-201ENST00000517602 280 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AP004607.1-201ENST00000524456 203 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 OR11H5P-201ENST00000554039 926 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC018714.1-201ENST00000605028 208 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AP002360.4-201ENST00000606980 481 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.15-201ENST00000611544 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.16-201ENST00000613119 191 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms