Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC027807.1-201ENST00000559921 996 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC098848.2-201ENST00000588023 330 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC087241.4-201ENST00000612441 480 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AL589743.7-201ENST00000612637 233 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC005332.10-201ENST00000612725 619 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC004852.3-201ENST00000614131 326 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC091834.1-201ENST00000614543 472 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC005858.4-201ENST00000623191 700 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC093536.2-201ENST00000565257 1406 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC004944.1-201ENST00000517807 3059 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 RNU6-1097P-201ENST00000363586 107 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 RNA5SP37-201ENST00000365420 130 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.367-201ENST00000365544 101 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 MIR1-2-201ENST00000384961 85 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AL139156.1-201ENST00000412785 841 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 RPL26P27-201ENST00000414397 437 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 MTND1P23-201ENST00000416931 372 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC133104.1-201ENST00000429100 218 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 GPR143P-201ENST00000434155 205 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC098831.1-201ENST00000440661 216 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 BRK1P2-201ENST00000442875 223 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 MTATP6P7-201ENST00000453315 681 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 C1DP4-201ENST00000455429 424 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 RPL26P9-201ENST00000457466 433 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC092798.1-201ENST00000458542 409 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC116562.3-201ENST00000506136 177 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC092436.1-201ENST00000506450 503 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 RBBP4P6-201ENST00000508098 202 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC098591.2-201ENST00000510152 315 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC008716.1-201ENST00000511084 513 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC068587.5-201ENST00000528506 175 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC010546.1-201ENST00000569391 485 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC012409.4-201ENST00000612923 249 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC008498.1-201ENST00000613012 531 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AP001486.3-201ENST00000615334 372 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 AC072046.2-201ENST00000618366 268 ntBASIC2.4□□□□□ -2.03
RNF41Q9H4P4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
RNF41Q9H4P4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6-641P-201ENST00000384006 107 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6-190P-201ENST00000384154 102 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MIR627-201ENST00000384979 97 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AL079342.1-201ENST00000401460 267 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU4-26P-201ENST00000410270 107 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC016907.1-201ENST00000419483 435 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MTCYBP5-201ENST00000423752 1135 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 USP9YP14-201ENST00000430663 563 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AL358934.1-201ENST00000432346 324 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC091133.4-201ENST00000511142 308 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6-123P-201ENST00000516163 102 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6-685P-201ENST00000517088 95 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 RNU1-104P-201ENST00000517280 175 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC022634.1-201ENST00000520765 532 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC025755.1-201ENST00000521306 278 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MIR1273C-201ENST00000578669 77 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MIR4775-201ENST00000581168 75 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC090616.3-201ENST00000582184 217 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MIR3611-201ENST00000584484 83 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC009314.1-201ENST00000603871 304 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AL022154.1-201ENST00000604698 785 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC138649.3-201ENST00000622154 254 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC092656.1-203ENST00000624134 423 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AL512643.1-201ENST00000635735 524 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RNF41Q9H4P4 AC110491.1-201ENST00000562191 2010 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 MTND5P17-201ENST00000418405 1603 ntBASIC2.39□□□□□ -2.03
RNF41Q9H4P4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.159-201ENST00000363674 87 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 RNU4-24P-201ENST00000364565 139 ntBASIC2.38□□□□□ -2.03
RNF41Q9H4P4 SNORD115-7-201ENST00000365306 82 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms