Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS11Q9H270 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS11Q9H270 AC025423.5-201ENST00000550230 219 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AC026371.1-201ENST00000551867 419 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS11Q9H270 AC106782.4-201ENST00000568264 210 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AC091167.4-201ENST00000605079 184 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 AP001282.2-201ENST00000616149 309 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 AL359854.1-201ENST00000614203 1594 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS11Q9H270 AL136164.4-201ENST00000625013 2135 ntBASIC3.88□□□□□ -1.79
VPS11Q9H270 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS11Q9H270 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS11Q9H270 RNY1-201ENST00000364228 113 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 Y_RNA.297-201ENST00000364950 91 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 RNU6-715P-201ENST00000365204 103 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 SMIM11P1-201ENST00000369586 178 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 Y_RNA.464-201ENST00000384282 110 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 RNU6-393P-201ENST00000384475 107 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 SAR1AP2-201ENST00000392696 594 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AL138885.1-201ENST00000405921 675 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AC002075.2-201ENST00000425207 252 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 MYL8P-204ENST00000431574 518 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS11Q9H270 TBCAP1-201ENST00000436520 327 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 NEFMP1-201ENST00000443423 1006 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS11Q9H270 NDUFB1P2-201ENST00000449477 176 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 SSXP4-201ENST00000451349 245 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 MTCO3P8-201ENST00000453691 755 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AC092436.3-201ENST00000511788 257 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 RNA5SP291-201ENST00000517222 105 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 AP003733.2-201ENST00000529409 171 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 RANP3-201ENST00000530970 276 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AC109446.1-201ENST00000566172 220 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 MIR5096-201ENST00000583713 70 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AC067852.3-201ENST00000589177 561 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS11Q9H270 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS11Q9H270 AL589994.2-201ENST00000621124 579 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AC007998.5-201ENST00000622938 237 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 AC130454.1-201ENST00000622948 401 ntBASIC3.87□□□□□ -1.79
VPS11Q9H270 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS11Q9H270 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS11Q9H270 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS11Q9H270 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS11Q9H270 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS11Q9H270 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS11Q9H270 AC007785.2-201ENST00000598627 1916 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS11Q9H270 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
VPS11Q9H270 RNA5SP240-201ENST00000365355 128 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 Y_RNA.506-201ENST00000384494 102 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 SNORD58.1-201ENST00000391313 66 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 RNU6-493P-201ENST00000391321 108 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 RNU6-1156P-201ENST00000410365 100 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 BX276092.3-201ENST00000424182 230 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 CALM2P2-201ENST00000428512 440 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 ARF4P2-201ENST00000430209 526 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AL353997.1-201ENST00000432936 108 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS11Q9H270 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS11Q9H270 AL359672.1-201ENST00000442302 409 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AC087369.1-201ENST00000520775 996 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS11Q9H270 AC009643.1-201ENST00000532030 391 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS11Q9H270 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS11Q9H270 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS11Q9H270 MIR3138-201ENST00000585238 82 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AC034102.8-201ENST00000615146 484 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AC002076.2-201ENST00000617362 122 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS11Q9H270 U6.104-201ENST00000637979 90 ntBASIC3.86□□□□□ -1.79
VPS11Q9H270 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
VPS11Q9H270 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS11Q9H270 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
VPS11Q9H270 RNU6-545P-201ENST00000362681 104 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 Y_RNA.151-201ENST00000363566 112 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS11Q9H270 RNU6-946P-201ENST00000383878 107 ntBASIC3.85□□□□□ -1.79
VPS11Q9H270 SNORA1.3-201ENST00000384676 136 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms