Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SNORA44.1-201ENST00000517031 108 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 OR5B19P-201ENST00000531766 928 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 RN7SL793P-201ENST00000583259 296 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 MIR8084-201ENST00000614105 89 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AL359314.1-201ENST00000616913 261 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC017037.3-201ENST00000625016 472 ntBASIC1.29□□□□□ -2.2
TRIM4Q9C037 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM4Q9C037 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.29□□□□□ -2.2
TRIM4Q9C037 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC127391.1-201ENST00000411737 98 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 MTND1P21-201ENST00000412991 285 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 GPM6BP2-201ENST00000432046 144 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 RPS15AP9-201ENST00000439856 381 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 GPM6BP1-201ENST00000446387 144 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC020550.1-201ENST00000447385 163 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC121161.1-201ENST00000510606 652 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 CYCSP27-201ENST00000527643 293 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM4Q9C037 IMMP1LP2-201ENST00000552954 492 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC023813.2-201ENST00000564321 469 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC091057.3-201ENST00000602684 733 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM4Q9C037 AC138627.2-201ENST00000624202 601 ntBASIC1.28□□□□□ -2.2
TRIM4Q9C037 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
TRIM4Q9C037 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM4Q9C037 MIR424-201ENST00000362227 98 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 MIR216A-201ENST00000385063 110 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-952P-201ENST00000391164 108 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNA5SP465-201ENST00000391195 109 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AL133475.1-201ENST00000404414 305 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC009310.1-201ENST00000414414 451 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 SNRPGP13-201ENST00000442212 177 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 MTCO3P45-201ENST00000443036 613 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC079448.1-201ENST00000449377 373 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 FABP5P15-201ENST00000453566 214 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AL583843.1-201ENST00000456070 346 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RPS3AP22-201ENST00000488297 769 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC139453.3-201ENST00000493276 369 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-390P-201ENST00000516259 103 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-362P-201ENST00000516736 90 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-678P-201ENST00000516832 109 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 ACA59.2-201ENST00000517061 156 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-667P-201ENST00000517186 102 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM4Q9C037 CR383656.8-201ENST00000549046 145 ntBASIC1.27□□□□□ -2.21
TRIM4Q9C037 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM4Q9C037 RNU6-432P-201ENST00000384196 109 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AL445305.1-201ENST00000432577 575 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 MTND2P20-201ENST00000440805 661 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 MTND2P30-201ENST00000456663 382 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 FCF1P6-201ENST00000456841 595 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 RNU7-136P-201ENST00000458819 69 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC004223.1-201ENST00000479840 271 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC026414.1-201ENST00000504046 698 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC110760.3-202ENST00000515177 371 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 RNU6-751P-201ENST00000516382 101 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AP000907.2-201ENST00000530827 353 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 BBIP1P1-201ENST00000602999 279 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC026741.1-201ENST00000605892 482 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC096772.1-201ENST00000609146 564 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
TRIM4Q9C037 RBBP8P1-201ENST00000449447 1844 ntBASIC1.26□□□□□ -2.21
TRIM4Q9C037 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM4Q9C037 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM4Q9C037 MTND4P21-201ENST00000453886 1357 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 RNU5E-1-201ENST00000362477 120 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 RNU6-223P-201ENST00000362830 107 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 RNU4-41P-201ENST00000364426 143 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 MIR30A-201ENST00000385092 71 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRIM4Q9C037 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 UBE2V1P4-201ENST00000425374 344 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms