Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC099842.1-201ENST00000619919 596 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC017037.3-201ENST00000625016 472 ntBASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UPF3BQ9BZI7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC138393.1-203ENST00000327086 343 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 RNU6-53P-201ENST00000365367 106 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 RNU6-203P-201ENST00000384038 104 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 MRPS36P1-201ENST00000421291 307 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 USP9YP24-201ENST00000434374 697 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC093809.1-201ENST00000509155 340 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 RNU6-1183P-201ENST00000517054 60 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AP005597.4-201ENST00000526762 229 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AL137100.2-201ENST00000555786 315 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC073544.2-201ENST00000601155 540 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AC091304.6-201ENST00000619761 202 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 Z99571.1-201ENST00000636677 394 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 AL161722.3-201ENST00000605789 2983 ntBASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.57□□□□□ -2.16
UPF3BQ9BZI7 MIR1283-2-201ENST00000408621 87 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC092001.1-201ENST00000453012 261 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 FCF1P6-201ENST00000456841 595 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC010631.1-201ENST00000474150 156 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 RPL7P43-201ENST00000478876 753 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 RNU6-581P-201ENST00000516214 105 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 RNU6-390P-201ENST00000516259 103 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 ACA59.2-201ENST00000517061 156 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 OR5B19P-201ENST00000531766 928 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 CYB5AP5-201ENST00000549779 389 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.56□□□□□ -2.16
UPF3BQ9BZI7 RNU6-188P-201ENST00000364207 107 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC078974.1-201ENST00000411597 223 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 SRIP3-201ENST00000413200 219 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 C1DP1-201ENST00000426049 402 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC118469.1-201ENST00000442943 488 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 MTND1P31-201ENST00000449206 961 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 OR6C5P-201ENST00000452388 923 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC112492.4-201ENST00000456549 352 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC092991.1-201ENST00000477176 376 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC116655.1-201ENST00000508324 901 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 TPT1P8-201ENST00000510120 555 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 ELOCP5-201ENST00000604924 333 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC006338.1-201ENST00000618453 749 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 AC092192.1-201ENST00000633154 1018 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 DDX43P2-201ENST00000604753 1354 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.55□□□□□ -2.16
UPF3BQ9BZI7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 RPL21P24-201ENST00000413752 448 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 MTND4P15-201ENST00000437913 1033 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 MTATP6P30-201ENST00000443540 664 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC245102.2-201ENST00000448956 180 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC112771.1-201ENST00000463581 102 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC006512.1-201ENST00000468816 291 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC093801.2-201ENST00000503966 1050 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC024589.1-201ENST00000512207 263 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 FABP5P5-201ENST00000515537 406 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms