Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC009518.2-201ENST00000418056 731 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.59□□□□□ -2.31
VPS25Q9BRG1 MTND4LP7-201ENST00000431728 294 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 FDX1P2-201ENST00000450769 375 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS25Q9BRG1 RPL30P12-201ENST00000474666 353 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC023194.1-201ENST00000493084 308 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC093259.1-201ENST00000509755 300 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 CYCSP23-201ENST00000519781 313 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.59□□□□□ -2.31
VPS25Q9BRG1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC012065.4-201ENST00000602445 679 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC098614.4-201ENST00000607601 462 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 AC090970.3-201ENST00000612566 866 ntBASIC0.59□□□□□ -2.31
VPS25Q9BRG1 RNA5SP493-201ENST00000364115 91 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 MIR186-201ENST00000384988 86 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 MIR548B-201ENST00000385247 97 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 SNORA11.1-201ENST00000408133 129 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 RN7SKP61-201ENST00000410642 295 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS25Q9BRG1 ISCA1P1-201ENST00000426679 387 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AL590623.1-201ENST00000427864 105 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 MTND5P15-201ENST00000434246 349 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AC130509.1-201ENST00000464158 433 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AL672167.3-201ENST00000465951 960 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AC087343.1-201ENST00000477341 475 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 TRBV12-1-201ENST00000479785 344 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS25Q9BRG1 MIR3169-201ENST00000578032 83 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AC073410.2-201ENST00000603240 332 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AL157834.3-201ENST00000615543 103 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AC120349.3-201ENST00000624377 529 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AL136313.1-201ENST00000624804 202 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 OR4G3P-201ENST00000633500 913 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 AC099063.3-201ENST00000642066 185 ntBASIC0.58□□□□□ -2.32
VPS25Q9BRG1 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 SNORD114-6-201ENST00000364393 72 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 Y_RNA.255-201ENST00000364581 97 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 RNU6-296P-201ENST00000384608 107 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 SNORA67.5-201ENST00000391036 107 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 RNU6-1300P-201ENST00000391046 108 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AL021407.1-201ENST00000404531 386 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 FTH1P12-201ENST00000432137 551 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC104058.1-201ENST00000448028 297 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC116337.1-201ENST00000509680 687 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AL512310.8-201ENST00000550183 120 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC015688.6-201ENST00000577737 104 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 MIR4421-201ENST00000578133 69 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 BNIP3P33-201ENST00000598912 569 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 MZT1P2-201ENST00000604387 248 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AL133445.2-201ENST00000611191 527 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 AC013470.4-201ENST00000619978 986 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 MIR1248-201ENST00000629190 106 ntBASIC0.57□□□□□ -2.32
VPS25Q9BRG1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS25Q9BRG1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RNU6-1207P-201ENST00000384343 107 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RNU6-754P-201ENST00000391166 107 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AL590084.2-201ENST00000401481 382 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 FTH1P15-201ENST00000406984 280 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC138623.1-201ENST00000418060 216 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 MTCO2P5-201ENST00000422621 426 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AL589872.1-201ENST00000426602 288 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 MTCO3P45-201ENST00000443036 613 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 KATNBL1P3-201ENST00000443475 909 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RN7SKP210-201ENST00000459176 261 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC010631.1-201ENST00000474150 156 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC104629.1-201ENST00000494226 508 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC074344.1-201ENST00000512823 224 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RNU6-197P-201ENST00000516680 100 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 RNU6-1261P-201ENST00000517194 104 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AC079148.1-201ENST00000565944 819 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 AP003465.2-201ENST00000602571 373 ntBASIC0.56□□□□□ -2.32
VPS25Q9BRG1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms