Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC092001.1-201ENST00000453012 261 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 Z82190.1-201ENST00000454534 490 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 U8.21-201ENST00000459536 136 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.11□□□□□ -2.39
COL12A1Q99715 AC104417.1-201ENST00000523974 751 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC010186.2-204ENST00000537668 439 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC034236.3-201ENST00000605999 461 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.11□□□□□ -2.39
COL12A1Q99715 AL078604.3-201ENST00000615580 211 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.11□□□□□ -2.39
COL12A1Q99715 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
COL12A1Q99715 SNORD18A-201ENST00000363753 72 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 SNORA40.19-201ENST00000390846 128 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 RNU6-1197P-201ENST00000391183 107 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
COL12A1Q99715 RPL36AP53-201ENST00000432891 316 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 MTCYBP34-201ENST00000439552 670 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.11□□□□□ -2.39
COL12A1Q99715 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.11□□□□□ -2.39
COL12A1Q99715 RPL31P3-201ENST00000458430 332 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
COL12A1Q99715 ACA64.5-201ENST00000516207 127 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 RNU6-158P-201ENST00000517104 100 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.11□□□□□ -2.39
COL12A1Q99715 AC016256.1-201ENST00000547971 354 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 AC018638.7-201ENST00000605836 1114 ntBASIC0.11□□□□□ -2.39
COL12A1Q99715 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
COL12A1Q99715 RNA5SP125-201ENST00000364843 120 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
COL12A1Q99715 AC009310.1-201ENST00000414414 451 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC048346.1-201ENST00000510247 144 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.1□□□□□ -2.39
COL12A1Q99715 AL355877.2-201ENST00000603670 358 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 ZNF663P-202ENST00000641770 1131 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 MTND4P14-201ENST00000435799 1354 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC016716.1-201ENST00000265882 708 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 Y_RNA.616-201ENST00000410835 95 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 PDCL2P1-201ENST00000419302 352 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AL096803.2-201ENST00000450032 677 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC107626.1-201ENST00000471084 183 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 COX6CP6-201ENST00000490840 228 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL12A1Q99715 RNA5SP180-201ENST00000516181 101 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.1□□□□□ -2.39
COL12A1Q99715 AC018659.1-201ENST00000551083 169 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 BNIP3P25-201ENST00000596023 559 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 RAC1P9-201ENST00000604990 392 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 U3.20-201ENST00000390909 217 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 EIF4EP2-201ENST00000422816 654 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 OR51AB1P-201ENST00000429046 620 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.1□□□□□ -2.39
COL12A1Q99715 MIR892C-201ENST00000516410 77 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 RNA5SP461-201ENST00000516451 104 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 RNA5SP404-201ENST00000517118 132 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 OR5AK1P-201ENST00000524837 922 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AP003122.4-201ENST00000530980 758 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.1□□□□□ -2.39
COL12A1Q99715 AL359212.1-201ENST00000556608 614 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AL713866.2-201ENST00000603579 219 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 AC091304.9-201ENST00000612091 226 ntBASIC0.1□□□□□ -2.39
COL12A1Q99715 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.09□□□□□ -2.39
COL12A1Q99715 SNORA63D-201ENST00000364359 132 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 RNU6-348P-201ENST00000384386 107 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 RPS15AP5-201ENST00000436276 388 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.09□□□□□ -2.39
COL12A1Q99715 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.09□□□□□ -2.39
COL12A1Q99715 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 RNU7-23P-201ENST00000459465 62 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.09□□□□□ -2.39
COL12A1Q99715 MIR5093-201ENST00000583199 100 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 AC008121.1-201ENST00000603244 268 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 MIR8064-201ENST00000612863 90 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 AL590410.1-201ENST00000617925 333 ntBASIC0.09□□□□□ -2.39
COL12A1Q99715 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.09□□□□□ -2.39
COL12A1Q99715 RNU6-1097P-201ENST00000363586 107 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 U3.9-201ENST00000363823 204 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.09□□□□□ -2.4
COL12A1Q99715 HSPE1P9-201ENST00000440046 311 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 MTATP6P23-201ENST00000440153 476 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.09□□□□□ -2.4
COL12A1Q99715 MIR3681-201ENST00000580089 72 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 MTCO2P2-201ENST00000591258 225 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AL592221.1-201ENST00000605266 382 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AC121334.2-201ENST00000605387 271 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AC009509.4-201ENST00000619202 509 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 Y_RNA.778-201ENST00000620203 90 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 AC092192.1-201ENST00000633154 1018 ntBASIC0.09□□□□□ -2.4
COL12A1Q99715 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
COL12A1Q99715 MIR608-201ENST00000384820 100 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 SPINT5P-201ENST00000448174 155 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.08□□□□□ -2.4
COL12A1Q99715 HMGB1P22-201ENST00000505315 124 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AL021997.1-201ENST00000605757 193 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AL662814.1-201ENST00000617364 121 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC008147.4-201ENST00000617570 1204 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC073349.3-201ENST00000617616 186 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms