Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RAD9AQ99638 RNU6-192P-201ENST00000391253 100 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.78□□□□□ -1.96
RAD9AQ99638 CALM2P3-201ENST00000400429 449 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 RNA5SP111-201ENST00000411386 101 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AC009414.1-201ENST00000427200 443 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.78□□□□□ -1.96
RAD9AQ99638 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RAD9AQ99638 MTND3P21-201ENST00000433774 331 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 MTATP6P7-201ENST00000453315 681 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC027673.1-201ENST00000456245 405 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AL356010.1-201ENST00000456364 102 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AL162395.1-201ENST00000457882 422 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 SRRM1P2-201ENST00000464531 1192 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC126182.1-201ENST00000478134 357 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AIG1P1-201ENST00000503376 148 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC098591.2-201ENST00000510152 315 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RNU6-314P-201ENST00000516574 104 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RNU6-703P-201ENST00000516946 107 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RNA5SP503-201ENST00000517047 117 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 RNU6-685P-201ENST00000517088 95 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.78□□□□□ -1.96
RAD9AQ99638 OR5BN1P-201ENST00000532955 829 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC243972.3-201ENST00000539655 198 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.78□□□□□ -1.96
RAD9AQ99638 MTCO3P13-201ENST00000577757 781 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 MIR1273C-201ENST00000578669 77 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.78□□□□□ -1.96
RAD9AQ99638 AC146944.4-201ENST00000602697 718 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 MTND4LP5-201ENST00000605152 292 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AF250324.2-201ENST00000608299 610 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AL020991.1-201ENST00000612314 373 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 AC068792.1-201ENST00000621354 417 ntBASIC2.78□□□□□ -1.96
RAD9AQ99638 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RAD9AQ99638 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RAD9AQ99638 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
RAD9AQ99638 RNU6-1287P-201ENST00000362914 107 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 Y_RNA.381-201ENST00000365666 102 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 RNU6-1029P-201ENST00000384109 107 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 RNU6-1060P-201ENST00000384664 107 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 MIR518C-201ENST00000384822 101 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RAD9AQ99638 AL591416.1-201ENST00000404015 867 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 UBE2V1P10-201ENST00000414685 269 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.77□□□□□ -1.97
RAD9AQ99638 SKA2P1-201ENST00000425592 390 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 MTCO3P30-201ENST00000426425 670 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 CALM2P2-201ENST00000428512 440 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 TIMM9P3-201ENST00000428659 274 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.77□□□□□ -1.97
RAD9AQ99638 BRK1P2-201ENST00000442875 223 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 HIGD1AP2-201ENST00000446367 280 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AL353705.4-201ENST00000449661 238 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RAD9AQ99638 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.77□□□□□ -1.97
RAD9AQ99638 RNU7-63P-201ENST00000459054 62 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 RPL36AP51-201ENST00000487216 318 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC139453.3-201ENST00000493276 369 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC098799.2-201ENST00000509466 868 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC009646.1-201ENST00000510455 318 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.77□□□□□ -1.97
RAD9AQ99638 RNU6-1315P-201ENST00000517187 99 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.77□□□□□ -1.97
RAD9AQ99638 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
RAD9AQ99638 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 HMGN2P15-201ENST00000585707 270 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC008752.3-201ENST00000588113 712 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 AC126118.1-201ENST00000607744 628 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
RAD9AQ99638 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.77□□□□□ -1.97
RAD9AQ99638 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.77□□□□□ -1.97
RAD9AQ99638 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.77□□□□□ -1.97
RAD9AQ99638 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.77□□□□□ -1.97
RAD9AQ99638 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RAD9AQ99638 MTND4P35-201ENST00000604257 1375 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RAD9AQ99638 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RAD9AQ99638 NACAP2-201ENST00000318548 624 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 RNU6-1085P-201ENST00000363576 107 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 RNU6-1158P-201ENST00000391167 107 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 AF274854.1-201ENST00000413236 615 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 USP9YP6-201ENST00000413550 854 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 OR6C66P-201ENST00000414917 930 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.76□□□□□ -1.97
RAD9AQ99638 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.76□□□□□ -1.97
RAD9AQ99638 BPY2DP-201ENST00000422208 265 ntBASIC2.76□□□□□ -1.97
RAD9AQ99638 MTCYBP5-201ENST00000423752 1135 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms