Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.98□□□□□ -2.09
SCN2AQ99250 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN2AQ99250 AP002360.4-201ENST00000606980 481 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 uc_338.14-201ENST00000613162 166 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 ADAM3A-203ENST00000461344 2157 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 MAPK10-266ENST00000641066 6555 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 RNU4-21P-201ENST00000362802 126 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 RNU6-884P-201ENST00000363889 107 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 RNU6-748P-201ENST00000384648 107 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AL353729.1-201ENST00000425044 720 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AC073464.1-201ENST00000429823 534 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 USP9YP12-201ENST00000450481 570 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 snoU13.23-201ENST00000458863 104 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AC010424.1-201ENST00000506336 297 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 MTND4P2-201ENST00000507767 1203 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN2AQ99250 PRELID2P1-201ENST00000552837 301 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN2AQ99250 RSL24D1P11-201ENST00000591045 491 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN2AQ99250 RN7SKP299-201ENST00000606679 301 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AC006566.1-201ENST00000608943 513 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AL512643.1-201ENST00000635735 524 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 AP003399.1-201ENST00000637534 361 ntBASIC1.98□□□□□ -2.09
SCN2AQ99250 ZNF720P1-201ENST00000562403 1939 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 RNU6-942P-201ENST00000363002 107 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 Y_RNA.201-201ENST00000364052 96 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 FO393413.1-201ENST00000402892 195 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN2AQ99250 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN2AQ99250 MIR1302-8-201ENST00000408342 128 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 EEF1A1P40-201ENST00000412883 573 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN2AQ99250 DDX3P2-201ENST00000446138 111 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 MTND1P29-201ENST00000448112 647 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC012308.1-201ENST00000451232 178 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN2AQ99250 RPS27AP10-201ENST00000496103 208 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 RNU6-677P-201ENST00000516914 101 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC012414.6-201ENST00000568241 401 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 MIR3616-201ENST00000584070 92 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN2AQ99250 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SCN2AQ99250 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.97□□□□□ -2.09
SCN2AQ99250 AC124864.2-201ENST00000624736 186 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN2AQ99250 MIR7157-201ENST00000635801 60 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 AC010889.1-201ENST00000566193 2666 ntBASIC1.97□□□□□ -2.09
SCN2AQ99250 RNU6-188P-201ENST00000364207 107 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 SNORA20.2-201ENST00000383922 131 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 RNU6-817P-201ENST00000391083 104 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AL663109.1-201ENST00000411498 844 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AC023141.4-201ENST00000412031 328 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
SCN2AQ99250 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.96□□□□□ -2.09
SCN2AQ99250 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.96□□□□□ -2.09
SCN2AQ99250 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.96□□□□□ -2.09
SCN2AQ99250 MTCO2P11-201ENST00000431069 680 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AC079448.1-201ENST00000449377 373 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 FABP5P15-201ENST00000453566 214 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AL162395.1-201ENST00000457882 422 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 RNU7-23P-201ENST00000459465 62 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.96□□□□□ -2.09
SCN2AQ99250 RPL37P25-201ENST00000507308 276 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AC117532.1-201ENST00000514638 323 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.96□□□□□ -2.09
SCN2AQ99250 AP002963.1-201ENST00000530590 184 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 NACAP3-201ENST00000552100 481 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AC024909.2-201ENST00000553035 286 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.96□□□□□ -2.09
SCN2AQ99250 AC103810.1-201ENST00000579873 453 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 AL161734.1-201ENST00000609720 557 ntBASIC1.96□□□□□ -2.09
SCN2AQ99250 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
SCN2AQ99250 NACAP2-201ENST00000318548 624 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 Y_RNA.553-201ENST00000384670 102 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC104651.1-201ENST00000427559 735 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 MED13P1-201ENST00000428342 171 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC133104.1-201ENST00000429100 218 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AL592045.1-201ENST00000429867 352 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN2AQ99250 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN2AQ99250 AC016691.1-201ENST00000441321 413 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC023194.1-201ENST00000493084 308 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 GZMAP1-201ENST00000503054 631 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN2AQ99250 AC116337.1-201ENST00000509680 687 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 RNU6-581P-201ENST00000516214 105 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN2AQ99250 AK6P1-201ENST00000540219 478 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN2AQ99250 AC002984.1-201ENST00000591692 448 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 RNU6-91P-201ENST00000607774 107 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC073114.1-201ENST00000612027 490 ntBASIC1.96□□□□□ -2.1
SCN2AQ99250 AC004852.3-201ENST00000614131 326 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms