Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL158209.2-201ENST00000619266 216 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 AC073534.2-201ENST00000620377 381 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 CR381653.2-201ENST00000624041 768 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 SCARNA4-202ENST00000625402 129 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 MIR6863-201ENST00000636112 90 ntBASIC2.3□□□□□ -2.04
RAB40CQ96S21 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.3□□□□□ -2.04
RAB40CQ96S21 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 RNU6-996P-201ENST00000365438 107 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RAB40CQ96S21 RNU6-517P-201ENST00000384362 110 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 RNU6-607P-201ENST00000411283 108 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 RPL30P4-201ENST00000429309 333 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 HIGD1AP2-201ENST00000446367 280 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AL671855.1-201ENST00000446875 1203 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 BX510359.1-201ENST00000456973 237 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 MTCO3P9-201ENST00000506989 781 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC074344.1-201ENST00000512823 224 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC135279.1-201ENST00000543493 504 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 MIR5004-201ENST00000579078 107 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 LRRC37A5P-203ENST00000580181 585 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AL670379.10-201ENST00000604330 253 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AL670379.9-201ENST00000605428 253 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC139792.3-201ENST00000623525 224 ntBASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.29□□□□□ -2.04
RAB40CQ96S21 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RAB40CQ96S21 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RAB40CQ96S21 AC092593.1-201ENST00000515413 1815 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RAB40CQ96S21 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 RNU6-623P-201ENST00000363143 105 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 RNU6-1158P-201ENST00000391167 107 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 RNU6-903P-201ENST00000391270 109 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 RNU2-3P-201ENST00000410144 191 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC236972.1-201ENST00000433225 199 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 DNAJC19P4-201ENST00000440115 345 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 CALM1P1-201ENST00000442082 433 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 MRPL50P4-201ENST00000446432 475 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 SNRPFP3-201ENST00000457792 225 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC003982.1-202ENST00000469928 248 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 MED28P2-201ENST00000475771 317 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC090525.1-201ENST00000479116 478 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 SNORA70.24-201ENST00000517233 118 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AP003034.1-201ENST00000534621 422 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 BNIP3P6-201ENST00000549284 499 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 YPEL5P2-201ENST00000605553 359 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AP001596.2-201ENST00000608410 312 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC005046.1-201ENST00000608515 625 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AL354950.2-201ENST00000617939 290 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC138627.2-201ENST00000624202 601 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
RAB40CQ96S21 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAB40CQ96S21 AC073346.2-201ENST00000624724 2058 ntBASIC2.28□□□□□ -2.04
RAB40CQ96S21 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAB40CQ96S21 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
RAB40CQ96S21 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.27□□□□□ -2.05
RAB40CQ96S21 MTND4P14-201ENST00000435799 1354 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RNU6-942P-201ENST00000363002 107 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 SNORA67.1-201ENST00000364749 141 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 Y_RNA.333-201ENST00000365274 102 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RNU6-393P-201ENST00000384475 107 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 Y_RNA.517-201ENST00000384551 106 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RNU6-851P-201ENST00000384565 107 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RNU6-1127P-201ENST00000384580 107 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 AL133475.1-201ENST00000404414 305 ntBASIC2.27□□□□□ -2.05
RAB40CQ96S21 RPS4XP7-201ENST00000406274 780 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms