Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.713-201ENST00000517013 96 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AC093023.1-201ENST00000547375 507 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AC022968.1-201ENST00000567372 442 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MIR5701-3-201ENST00000578890 82 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MIR5701-1-201ENST00000585138 82 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AC008962.1-201ENST00000605729 304 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MIR5701-2-201ENST00000615634 82 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AP001282.2-201ENST00000616149 309 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 RMST_4.1-201ENST00000616886 107 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 AL450472.1-202ENST00000637286 180 ntBASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.56□□□□□ -1.68
SYNGAP1Q96PV0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 SRP72P2-201ENST00000344851 1979 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 SNORD74.4-201ENST00000364129 80 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.277-201ENST00000364754 102 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.358-201ENST00000365491 99 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.439-201ENST00000384119 94 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-301P-201ENST00000384277 107 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.539-201ENST00000384635 107 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.555-201ENST00000384673 110 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MIR513A2-201ENST00000385249 127 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 AL603910.2-201ENST00000407268 136 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 SNORD56-201ENST00000413522 71 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 SDAD1P3-201ENST00000427380 333 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MTCO3P29-201ENST00000432119 779 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 NDUFB1P2-201ENST00000449477 176 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MED28P2-201ENST00000475771 317 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 RN7SL323P-201ENST00000494712 295 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 RNU6-406P-201ENST00000516470 107 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 RNU7-143P-201ENST00000516781 65 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 AL590705.4-201ENST00000532209 134 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 AC009779.6-201ENST00000603972 165 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MIR8076-201ENST00000611401 83 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MIR376A1-201ENST00000616574 68 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MIR7702-201ENST00000621931 59 ntBASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNGAP1Q96PV0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC009812.4-201ENST00000569134 1805 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AL049555.1-201ENST00000562834 1933 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.458-201ENST00000384240 102 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.785-201ENST00000384290 109 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 MIR30B-201ENST00000384850 88 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC087588.1-201ENST00000462203 316 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 SCARNA24.2-201ENST00000516968 130 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 YPEL5P3-201ENST00000547227 352 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 FAM60BP-201ENST00000578364 658 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 MIR5696-201ENST00000578474 85 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC008121.1-201ENST00000603244 268 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC004792.1-201ENST00000614523 137 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 U6.105-201ENST00000637379 88 ntBASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.54□□□□□ -1.68
SYNGAP1Q96PV0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.27-201ENST00000362540 103 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 Y_RNA.143-201ENST00000363520 106 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AL139095.1-201ENST00000404326 391 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AL451050.1-201ENST00000450126 415 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC087190.1-201ENST00000484462 480 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC107032.1-201ENST00000485945 480 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 RN7SKP272-201ENST00000516988 232 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 AL161798.1-201ENST00000604630 131 ntBASIC4.53□□□□□ -1.68
SYNGAP1Q96PV0 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms