Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-898P-201ENST00000365627 104 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC069282.1-201ENST00000411911 526 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 CST2P1-201ENST00000425770 87 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 USP9YP18-201ENST00000425912 695 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 MTCO3P45-201ENST00000443036 613 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 USP9YP17-201ENST00000444617 696 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 PRPS1P1-201ENST00000445305 876 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AL035666.1-201ENST00000446195 348 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 HMGN2P18-201ENST00000450680 270 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AP001025.1-201ENST00000486139 332 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC093852.1-201ENST00000503587 266 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC079140.2-201ENST00000506193 142 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 RNU6-390P-201ENST00000516259 103 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AL356057.1-201ENST00000533798 831 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AP002906.1-201ENST00000603405 233 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AP000860.1-201ENST00000605250 559 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC012676.2-201ENST00000619258 186 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 MIR8063-201ENST00000621930 81 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 AC022513.1-201ENST00000624512 117 ntBASIC0.73□□□□□ -2.29
AP1S3Q96PC3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
AP1S3Q96PC3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 ICE2P2-201ENST00000483823 2787 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RNU1-17P-201ENST00000363022 152 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 U6.112-201ENST00000384129 70 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RPS12P24-201ENST00000412619 387 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AL669831.1-202ENST00000428504 417 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RPS4XP11-201ENST00000446897 772 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RNU7-136P-201ENST00000458819 69 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC087343.1-201ENST00000477341 475 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RPL26P26-201ENST00000480251 434 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC021382.1-201ENST00000483523 359 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RPL30P1-201ENST00000488676 339 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RNU6-965P-201ENST00000516721 96 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 SNORA76.2-201ENST00000517095 137 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AP001189.2-201ENST00000527320 189 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC022616.8-201ENST00000533569 253 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RPS3AP4-201ENST00000555161 764 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC123912.5-201ENST00000605470 343 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 SNORD114-21-201ENST00000606412 72 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC012360.2-201ENST00000609349 391 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AL355472.4-201ENST00000610233 626 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC009268.2-201ENST00000621925 457 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 AC095038.3-201ENST00000634439 195 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 U6.99-201ENST00000637524 83 ntBASIC0.72□□□□□ -2.29
AP1S3Q96PC3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
AP1S3Q96PC3 RNU6-414P-201ENST00000363705 104 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 RNU4-38P-201ENST00000364472 129 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 SNORD65.1-201ENST00000390889 71 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 SNRPEP10-201ENST00000420249 274 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC013410.2-201ENST00000422627 201 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 TRIM60P13-201ENST00000432350 1283 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 SEPT7P5-201ENST00000434048 306 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 JTBP1-201ENST00000441314 247 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 RPL23AP35-201ENST00000451906 501 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 RNU7-95P-201ENST00000459222 64 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 SNORA59A-201ENST00000459326 152 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC009902.1-201ENST00000519351 183 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC023538.1-201ENST00000534576 736 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 CYP3A52P-201ENST00000563326 91 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC079148.1-201ENST00000565944 819 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 MIR3169-201ENST00000578032 83 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.71□□□□□ -2.3
AP1S3Q96PC3 ZNF92P2-201ENST00000600543 1059 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 KATNBL1P5-201ENST00000605015 517 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 AC243773.3-201ENST00000613270 256 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.71□□□□□ -2.3
AP1S3Q96PC3 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
AP1S3Q96PC3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms