Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-2-201ENST00000384627 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-29P-201ENST00000384637 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-9-201ENST00000384776 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-33P-201ENST00000384793 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AL133475.1-201ENST00000404414 305 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC074117.2-201ENST00000417130 397 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 ARL5AP1-201ENST00000418991 388 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AL035423.1-201ENST00000420331 213 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AL671855.1-201ENST00000446875 1203 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RBMY2UP-201ENST00000453474 324 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RPL21P99-201ENST00000480369 423 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RPL38P4-201ENST00000502376 214 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC002456.2-201ENST00000509356 380 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 MTCYBP40-201ENST00000509390 1135 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC069113.1-201ENST00000517763 267 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC023050.3-201ENST00000541142 333 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC079598.5-201ENST00000547460 117 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AL356280.1-201ENST00000603614 379 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC080078.2-201ENST00000603766 501 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC021646.1-201ENST00000605469 484 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 RNU6-6P-201ENST00000606623 107 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC096772.1-201ENST00000609146 564 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC244517.12-201ENST00000623581 663 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 FO624990.1-201ENST00000636373 85 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 U4.7-201ENST00000638126 106 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 AC073869.6-201ENST00000640656 341 ntBASIC2.75□□□□□ -1.97
CMTM3Q96MX0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
CMTM3Q96MX0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.38-201ENST00000362617 102 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RNU6-1090P-201ENST00000364065 94 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RNA5SP219-201ENST00000390940 113 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 CYCSP19-201ENST00000411715 316 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 POLHP1-201ENST00000411806 470 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AC097463.2-201ENST00000421074 142 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 C8orf59P1-201ENST00000429930 303 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AL445687.1-201ENST00000439946 251 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RPL23AP45-201ENST00000476406 468 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RNU6-189P-201ENST00000516120 101 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 IGKV2-26-201ENST00000518305 343 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 RPS15AP11-201ENST00000594193 385 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 VN1R80P-201ENST00000597126 338 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 APOOP1-201ENST00000604695 592 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AL121917.1-203ENST00000605534 577 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 MIR6798-201ENST00000612887 67 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AC103705.1-201ENST00000619013 241 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AC034229.5-201ENST00000624258 185 ntBASIC2.74□□□□□ -1.97
CMTM3Q96MX0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CMTM3Q96MX0 AL035425.3-201ENST00000564206 4996 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 Z75746.1-201ENST00000440243 2080 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 OR4G1P-203ENST00000641984 1631 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 RNY3P3-201ENST00000363816 102 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 RNA5SP479-201ENST00000364858 117 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 SNORA62.3-201ENST00000365110 153 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.378-201ENST00000365652 113 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.450-201ENST00000384198 113 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 MIR514A2-201ENST00000385131 88 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 MIR514A3-201ENST00000385132 88 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 SNORD17-201ENST00000390930 237 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AL356967.1-201ENST00000406305 431 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 BX276092.3-201ENST00000424182 230 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 USP9YP18-201ENST00000425912 695 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC092017.2-201ENST00000427600 362 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 NOTCH2P1-201ENST00000443481 624 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 VN1R34P-201ENST00000447387 883 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 GSTA11P-201ENST00000452866 669 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 snoU13.22-201ENST00000459428 104 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC018437.1-201ENST00000492214 406 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 Y_RNA.654-201ENST00000497848 106 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC023141.11-201ENST00000508864 202 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 HIGD1AP13-201ENST00000509878 289 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC104619.4-201ENST00000510773 249 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 SNORA14.1-201ENST00000516113 141 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC109479.2-201ENST00000517842 174 ntBASIC2.73□□□□□ -1.97
CMTM3Q96MX0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms