Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AC108059.2-201ENST00000434626 151 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC009901.1-201ENST00000506703 541 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 SNORA31.22-201ENST00000517204 135 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 MIR3668-201ENST00000582138 75 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC006130.2-201ENST00000586202 326 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC078899.3-201ENST00000599065 212 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC124312.5-201ENST00000604451 268 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC002044.1-201ENST00000606707 158 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 AC107871.2-201ENST00000612894 502 ntBASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM2Q96JY6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.47-201ENST00000362697 108 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RNU6-266P-201ENST00000364225 107 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RNU6-371P-201ENST00000364283 108 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RNU6-505P-201ENST00000384427 107 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 U8.11-201ENST00000384699 133 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 U8.12-201ENST00000384701 133 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 MIR1302-3-201ENST00000408128 138 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 USMG5P1-201ENST00000425964 177 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC096644.2-201ENST00000429278 159 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 CYCSP4-201ENST00000429682 331 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RPL23AP50-201ENST00000434149 455 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 PRDX3P3-201ENST00000447765 522 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 SNORD5.1-201ENST00000458800 75 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 U8.18-201ENST00000459285 133 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC022493.2-201ENST00000506122 481 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC092436.3-201ENST00000511788 257 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 SNORA31.3-201ENST00000516029 96 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 RNU6-120P-201ENST00000516077 103 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 SCARNA16.2-201ENST00000516520 172 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC110588.1-201ENST00000559699 137 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC034105.4-201ENST00000568304 277 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC005951.2-201ENST00000576282 495 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 MIR5692A1-201ENST00000580523 69 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC090425.1-201ENST00000610007 140 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AL161423.1-201ENST00000613700 262 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 AC118273.1-201ENST00000525324 3006 ntBASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PDLIM2Q96JY6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 Y_RNA.496-201ENST00000384444 101 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 MIR887-201ENST00000401258 79 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 HMGB3P2-201ENST00000411913 584 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC008267.5-201ENST00000424928 265 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC097713.2-201ENST00000430199 356 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AL353705.1-201ENST00000433468 480 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 RNA5SP384-201ENST00000516615 116 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 IGKV2-26-201ENST00000518305 343 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 ERHP1-201ENST00000523006 310 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AL121603.1-201ENST00000553815 142 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AC011494.1-201ENST00000596454 237 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 VN1R107P-201ENST00000601784 209 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 BDH2P1-201ENST00000602288 736 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 U4.1-201ENST00000620349 87 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 Z69720.2-201ENST00000624755 279 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 AP003122.5-201ENST00000527668 3766 ntBASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM2Q96JY6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.51□□□□□ -1.85
PDLIM2Q96JY6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM2Q96JY6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM2Q96JY6 RNA5SP124-201ENST00000362739 110 ntBASIC3.51□□□□□ -1.85
PDLIM2Q96JY6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.51□□□□□ -1.85
PDLIM2Q96JY6 Y_RNA.176-201ENST00000363815 109 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms